RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 LONRF3Q496Y0 759 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 Q6YL49 198 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 SPATA31D4Q6ZUB0 917 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 ZNF365Q70YC5 407 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 OR2C3Q8N628 320 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 CPEB3Q8NE35 698 aaKnown RBP6.25□□□□□ -1.41
LSM5-209ENST00000468872 NLGN4YQ8NFZ3 816 aaPredicted RBP6.25□□□□□ -1.41
LSM5-209ENST00000468872 NEU1Q99519 415 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 DPH1Q9BZG8 443 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 GSTO2Q9H4Y5 243 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 BRD9Q9H8M2 597 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 PLCB1Q9NQ66 1216 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.25□□□□□ -1.41
LSM5-209ENST00000468872 MED16Q9Y2X0 877 aa6.25□□□□□ -1.41
LSM5-209ENST00000468872 USP15Q9Y4E8 981 aaPredicted RBP6.25□□□□□ -1.41
LSM5-209ENST00000468872 DRGXA6NNA5 263 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 F8W8V4 182 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 FOXN3O00409 490 aaPredicted RBP6.24□□□□□ -1.41
LSM5-209ENST00000468872 NCK2O43639 380 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 HAUS5O94927 633 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 POMCP01189 267 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 RARBP10826 455 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 SLC6A2P23975 617 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 CHN2P52757 468 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 UBXN2BQ14CS0 331 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 ATXN7L2Q5T6C5 722 aaPredicted RBP6.24□□□□□ -1.41
LSM5-209ENST00000468872 DPP9Q86TI2 863 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 VPS37AQ8NEZ2 397 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 MAML1Q92585 1016 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 SUCLG2Q96I99 432 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 UNKQ9C0B0 810 aaKnown RBP6.24□□□□□ -1.41
LSM5-209ENST00000468872 SMURF2Q9HAU4 748 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 RLIMQ9NVW2 624 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 CFAP97Q9P2B7 532 aa6.24□□□□□ -1.41
LSM5-209ENST00000468872 ABHD14A-ACY1A0A1B0GW23 586 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 POM121BA6NF01 834 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 UNC119BA6NIH7 251 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 MARCH11A6NNE9 402 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 IFRD1O00458 451 aaPredicted RBP6.23□□□□□ -1.41
LSM5-209ENST00000468872 HLA-DOAP06340 250 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 SETSIPP0DME0 302 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 ALAS1P13196 640 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 TSHRP16473 764 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 TNFSF4P23510 183 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 DDX6P26196 483 aaKnown RBP eCLIP6.23□□□□□ -1.41
LSM5-209ENST00000468872 KCNJ5P48544 419 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 PSMC1P62191 440 aaKnown RBP6.23□□□□□ -1.41
LSM5-209ENST00000468872 GUCY1B3Q02153 619 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 DAG1Q14118 895 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 C3orf38Q5JPI3 329 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 UTP14CQ5TAP6 766 aaKnown RBP6.23□□□□□ -1.41
LSM5-209ENST00000468872 AGAP9Q5VTM2 703 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 PDSS2Q86YH6 399 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 LIX1LQ8IVB5 337 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 OR6B3Q8NGW1 331 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 DEPTORQ8TB45 409 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 MSLNLQ96KJ4 702 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 ADAM2Q99965 735 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 SACM1LQ9NTJ5 587 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 COL20A1Q9P218 1284 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 AFF4Q9UHB7 1163 aaKnown RBP6.23□□□□□ -1.41
LSM5-209ENST00000468872 MAP3K2Q9Y2U5 619 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 FPGT-TNNI3KV9GXZ4 949 aa6.23□□□□□ -1.41
LSM5-209ENST00000468872 CDHR4A6H8M9 788 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 BTN3A1O00481 513 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 IL18RAPO95256 599 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 NUDT3O95989 172 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 STT3AP46977 705 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 FAM209BQ5JX69 171 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 C1orf228Q6PIY5 440 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 OLFML1Q6UWY5 402 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 LCORLQ8N3X6 602 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 RNF152Q8N8N0 203 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 PCSK9Q8NBP7 692 aaKnown RBP6.22□□□□□ -1.41
LSM5-209ENST00000468872 ACRBPQ8NEB7 543 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 TMIEQ8NEW7 156 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 NMD3Q96D46 503 aaKnown RBP6.22□□□□□ -1.41
LSM5-209ENST00000468872 PHACTR3Q96KR7 559 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 GPR35Q9HC97 309 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 PTPRHQ9HD43 1115 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 PNPLA8Q9NP80 782 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 STARD7Q9NQZ5 370 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 SYBUQ9NX95 663 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 AGAP1Q9UPQ3 857 aa6.22□□□□□ -1.41
LSM5-209ENST00000468872 TRIM43BA6NCK2 446 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 ZNF785A8K8V0 405 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 DNAJB5O75953 348 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 AGFG2O95081 481 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 PRSS23O95084 383 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 TGM1P22735 817 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 TP53BP2Q13625 1128 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 HABP2Q14520 560 aaPredicted RBP6.21□□□□□ -1.42
LSM5-209ENST00000468872 FAM83BQ5T0W9 1011 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 ZNF783Q6ZMS7 281 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 RHOT2Q8IXI1 618 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 FITM2Q8N6M3 262 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 SUPT20HQ8NEM7 779 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 KIAA1191Q96A73 305 aa6.21□□□□□ -1.42
LSM5-209ENST00000468872 TRIM43Q96BQ3 446 aaPredicted RBP6.21□□□□□ -1.42
LSM5-209ENST00000468872 KLHL32Q96NJ5 620 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms