RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 RNF216Q9NWF9 866 aaPredicted RBP19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 GDAP2Q9NXN4 497 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 CACNG4Q9UBN1 327 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 SQORQ9Y6N5 450 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 MICAL2O94851 1124 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 GJB6O95452 261 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 IGFBP6P24592 240 aaPredicted RBP19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 MARCKSL1P49006 195 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 TAF6P49848 677 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 CNGA2Q16280 664 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 SGO2Q562F6 1265 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 C12orf29Q8N999 325 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 USP38Q8NB14 1042 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 MSANTD4Q8NCY6 345 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 BEGAINQ9BUH8 593 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 PAK6Q9NQU5 681 aaPredicted RBP19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 RBM12Q9NTZ6 932 aaKnown RBP19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 GIT1Q9Y2X7 761 aa19.93■□□□□ 0.78
CHRNA4-203ENST00000467563 A0A0U1RQF3 1178 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 CALB1P05937 261 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 LILRA4P59901 499 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 PTPN20Q4JDL3 420 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 DPH6Q7L8W6 267 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 ERICH1Q86X53 443 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 RASGEF1CQ8N431 466 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 ACTRT1Q8TDG2 376 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 KBTBD7Q8WVZ9 684 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 PNKPQ96T60 521 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 SELENOOQ9BVL4 669 aa19.92■□□□□ 0.78
CHRNA4-203ENST00000467563 TCRBV5S1A1TA0A578 114 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 MIF4GDA9UHW6 222 aaKnown RBP19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 HCRTO43612 131 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 RAB27AP51159 221 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 LIMS2Q7Z4I7 341 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 ACOT1Q86TX2 421 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 MMGT1Q8N4V1 131 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 RNF169Q8NCN4 708 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 MRPL47Q9HD33 250 aaKnown RBP19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 PARVAQ9NVD7 372 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 TJP2Q9UDY2 1190 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 SCINQ9Y6U3 715 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 M0QYV0 167 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 MYO1FO00160 1098 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 DNM1LO00429 736 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 SPOPO43791 374 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 THP07101 528 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 FGFR1P11362 822 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 IBSPP21815 317 aaPredicted RBP19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 PEX5P50542 639 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 CDK7P50613 346 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 SCNN1GP51170 649 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 SV2CQ496J9 727 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 CYP4A22Q5TCH4 519 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 OR6B3Q8NGW1 331 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 DEFB118Q96PH6 123 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 CARD9Q9H257 536 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 TSPYL2Q9H2G4 693 aaPredicted RBP19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 SLC38A7Q9NVC3 462 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 KIAA1257Q9ULG3 409 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 L1RE1Q9UN81 338 aa19.91■□□□□ 0.78
CHRNA4-203ENST00000467563 GPD2P43304 727 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 RPL7AP62424 266 aaKnown RBP19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 LCLAT1Q6UWP7 414 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 UBA3Q8TBC4 463 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 CPXM1Q96SM3 734 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 WNT8AQ9H1J5 351 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 TSPAN16Q9UKR8 245 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 ZNF211Q13398 564 aaPredicted RBP19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 UNC93AQ86WB7 457 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 UBL4BQ8N7F7 174 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 FEZF2Q8TBJ5 459 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 DPEP3Q9H4B8 488 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 RSAD1Q9HA92 442 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 TMEM59LQ9UK28 342 aa19.9■□□□□ 0.78
CHRNA4-203ENST00000467563 PGRMC1O00264 195 aaKnown RBP19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 PROSCO94903 275 aa19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 LMO2P25791 158 aa19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 CTNNA1P35221 906 aaKnown RBP19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 PPP1R26Q5T8A7 1209 aaPredicted RBP19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 RTN4RL1Q86UN2 441 aaPredicted RBP19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 PDCL2Q8N4E4 241 aa19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 APPL2Q8NEU8 664 aa19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 LPIN3Q9BQK8 851 aa19.89■□□□□ 0.77
CHRNA4-203ENST00000467563 A8MXQ7 604 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 CTNNA2P26232 953 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 CLCN6P51797 869 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 CLCNKBP51801 687 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 PPP1R15BQ5SWA1 713 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 DAB2IPQ5VWQ8 1189 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 AADACL2Q6P093 401 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 DNAJC24Q6P3W2 148 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 FAM126BQ8IXS8 530 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 C3orf20Q8ND61 904 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 RNPC3Q96LT9 517 aaKnown RBP19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 FAM49BQ9NUQ9 324 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 TTC7AQ9ULT0 858 aaPredicted RBP19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 PCDHA3Q9Y5H8 950 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 TMEM191CA6NGB0 347 aa19.88■□□□□ 0.77
CHRNA4-203ENST00000467563 HUS1O60921 280 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms