RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 OR6B3Q8NGW1 331 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 RSPH1Q8WYR4 309 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 TOP1MTQ969P6 601 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 ZNF689Q96CS4 500 aaPredicted RBP13.83□□□□□ -0.2
COL4A1-202ENST00000467182 LPIN3Q9BQK8 851 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 RTP3Q9BQQ7 232 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 THAP2Q9H0W7 228 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 LUC7LQ9NQ29 371 aaKnown RBP13.83□□□□□ -0.2
COL4A1-202ENST00000467182 PUF60Q9UHX1 559 aaKnown RBP13.83□□□□□ -0.2
COL4A1-202ENST00000467182 KIAA1257Q9ULG3 409 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL4A1-202ENST00000467182 PAXBP1Q9Y5B6 917 aa13.83□□□□□ -0.2
COL4A1-202ENST00000467182 VWA8A3KMH1 1905 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 A8MXQ7 604 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 I3L4J1 428 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 LSM8O95777 96 aaKnown RBP13.82□□□□□ -0.2
COL4A1-202ENST00000467182 CYP11A1P05108 521 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 TNNT1P13805 278 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 CD19P15391 556 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 GNL1P36915 607 aaPredicted RBP13.82□□□□□ -0.2
COL4A1-202ENST00000467182 SLC11A1P49279 550 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 WDR5P61964 334 aaKnown RBP13.82□□□□□ -0.2
COL4A1-202ENST00000467182 ETF1P62495 437 aaKnown RBP13.82□□□□□ -0.2
COL4A1-202ENST00000467182 TCEAL1Q15170 157 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 CNGA2Q16280 664 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 PKDCCQ504Y2 493 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 NAA35Q5VZE5 725 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 ARHGAP17Q68EM7 881 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 LCLAT1Q6UWP7 414 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 DSTYKQ6XUX3 929 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 MON1BQ7L1V2 547 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 ACOT1Q86TX2 421 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 PHF13Q86YI8 300 aaPredicted RBP13.82□□□□□ -0.2
COL4A1-202ENST00000467182 PASD1Q8IV76 773 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 TMEM86AQ8N2M4 240 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 TXLNBQ8N3L3 684 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 C12orf29Q8N999 325 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 HASPINQ8TF76 798 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 SUSD3Q96L08 255 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 HEXIM2Q96MH2 286 aaKnown RBP13.82□□□□□ -0.2
COL4A1-202ENST00000467182 WDR24Q96S15 920 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 LHX5Q9H2C1 402 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 CWH43Q9H720 699 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
COL4A1-202ENST00000467182 MARCH5Q9NX47 278 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 CYTH4Q9UIA0 394 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
COL4A1-202ENST00000467182 KIAA1671Q9BY89 1806 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 A0A0A6YYK5 440 aaPredicted RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 NRP1O14786 923 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 MED7O43513 233 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 BAIAP3O94812 1187 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 MICAL2O94851 1124 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 MOCS3O95396 460 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 PDGFRBP09619 1106 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 ABCB4P21439 1286 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 OR1G1P47890 313 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 EPHB4P54760 987 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 RNASELQ05823 741 aaKnown RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 SGO2Q562F6 1265 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 PPP1R26Q5T8A7 1209 aaPredicted RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 SYT10Q6XYQ8 523 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 TMCO2Q7Z6W1 182 aaPredicted RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 MCOLN2Q8IZK6 566 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 ABI1Q8IZP0 508 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 SLC35F6Q8N357 371 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 RNF10Q8N5U6 811 aaKnown RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 SPATA18Q8TC71 538 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 CPA5Q8WXQ8 436 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 BADQ92934 168 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 SECISBP2LQ93073 1101 aaKnown RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 TMEM175Q9BSA9 504 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 MRPL9Q9BYD2 267 aaKnown RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 SNX25Q9H3E2 840 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 MYO1AQ9UBC5 1043 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 PCDHB8Q9UN66 801 aa13.81□□□□□ -0.2
COL4A1-202ENST00000467182 TIMM13Q9Y5L4 95 aaPredicted RBP13.81□□□□□ -0.2
COL4A1-202ENST00000467182 MACROD2A1Z1Q3 448 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 KIF2AO00139 706 aaPredicted RBP13.8□□□□□ -0.2
COL4A1-202ENST00000467182 KIF5CO60282 957 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 EFCAB14O75071 495 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 ATP2C2O75185 946 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 UPP2O95045 317 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 EFEMP2O95967 443 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 AMHP03971 560 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 TUBB4AP04350 444 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 CYP1A2P05177 515 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 GALTP07902 379 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 ODC1P11926 461 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 TYMPP19971 482 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 GPD2P43304 727 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 LHX1P48742 406 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 GNG11P61952 73 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 CCDC142Q17RM4 750 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 ZNF569Q5MCW4 686 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 TTC30AQ86WT1 665 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 C7orf61Q8IZ16 206 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 LRRC43Q8N309 656 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms