RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 GRASPQ7Z6J2 395 aaPredicted RBP12.49□□□□□ -0.41
CUX1-207ENST00000465461 TMEM86AQ8N2M4 240 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 STKLD1Q8NE28 680 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 SLC35C1Q96A29 364 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 UHRF1Q96T88 793 aaPredicted RBP12.49□□□□□ -0.41
CUX1-207ENST00000465461 RHOBTB2Q9BYZ6 727 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 DPEP3Q9H4B8 488 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 ZDHHC7Q9NXF8 308 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 GTF3C4Q9UKN8 822 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 INSL5Q9Y5Q6 135 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 SPTBN5Q9NRC6 3674 aaKnown RBP12.49□□□□□ -0.41
CUX1-207ENST00000465461 DOCK6Q96HP0 2047 aa12.49□□□□□ -0.41
CUX1-207ENST00000465461 STAU1O95793 577 aaKnown RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 C1RP00736 705 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 ASS1P00966 412 aaKnown RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 GTF2H1P32780 548 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 GNL1P36915 607 aaPredicted RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 ASPAP45381 313 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 LHX1P48742 406 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 GPR15P49685 360 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 MXI1P50539 228 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 LRMPQ12912 555 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 TPD52L1Q16890 204 aaPredicted RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 INTS6LQ5JSJ4 861 aaKnown RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 SDHAF4Q5VUM1 108 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 TPGS2Q68CL5 300 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 ELMSAN1Q6PJG2 1045 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 SASS6Q6UVJ0 657 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 CCDC149Q6ZUS6 474 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 IRF2BP1Q8IU81 584 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 TCEAL8Q8IYN2 117 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 ST13P5Q8NFI4 369 aaPredicted RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 CMASQ8NFW8 434 aaPredicted RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 GPR152Q8TDT2 470 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 TATDN2Q93075 761 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 CNOT6LQ96LI5 555 aaKnown RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 RIPOR3Q96MK2 946 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 PKMYT1Q99640 499 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 SEPT5Q99719 369 aaPredicted RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 SYT15Q9BQS2 421 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 ACBD6Q9BR61 282 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 PHF7Q9BWX1 381 aaPredicted RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 OXCT2Q9BYC2 517 aaPredicted RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 SNX25Q9H3E2 840 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 VRTNQ9H8Y1 702 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 METTL14Q9HCE5 456 aaKnown RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 CRTAC1Q9NQ79 661 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 RAB20Q9NX57 234 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 ABI2Q9NYB9 513 aaPredicted RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 CEP72Q9P209 647 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 DNMT3BQ9UBC3 853 aaKnown RBP12.48□□□□□ -0.41
CUX1-207ENST00000465461 DPP7Q9UHL4 492 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 FAM50BQ9Y247 325 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 YIPF1Q9Y548 306 aa12.48□□□□□ -0.41
CUX1-207ENST00000465461 A8MXQ7 604 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 NRG2O14511 850 aaPredicted RBP12.47□□□□□ -0.41
CUX1-207ENST00000465461 STX10O60499 249 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 TACC1O75410 805 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 LRG1P02750 347 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 SSTR3P32745 418 aaPredicted RBP12.47□□□□□ -0.41
CUX1-207ENST00000465461 MTHFRP42898 656 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 FMO5P49326 533 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 NOP14P78316 857 aaKnown RBP12.47□□□□□ -0.41
CUX1-207ENST00000465461 TSPY1Q01534 308 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 ZP2Q05996 745 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 ENPEPQ07075 957 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 UVSSAQ2YD98 709 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 MGAT5BQ3V5L5 792 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 FOXR2Q6PJQ5 311 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 TRIM59Q8IWR1 403 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 DCP1BQ8IZD4 617 aaKnown RBP12.47□□□□□ -0.41
CUX1-207ENST00000465461 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 FBXL13Q8NEE6 735 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 GIPC2Q8TF65 315 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 SAMSN1Q9NSI8 373 aaKnown RBP12.47□□□□□ -0.41
CUX1-207ENST00000465461 HMGXB4Q9UGU5 601 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
CUX1-207ENST00000465461 C2CD4DB7Z1M9 353 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 FGFR1OPO95684 399 aaKnown RBP12.46□□□□□ -0.41
CUX1-207ENST00000465461 GNA14O95837 355 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 HNRNPA1P09651 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
CUX1-207ENST00000465461 CCDC192P0DO97 292 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 HAPLN1P10915 354 aaPredicted RBP12.46□□□□□ -0.41
CUX1-207ENST00000465461 CD58P19256 250 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 CYP2F1P24903 491 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 ERCC5P28715 1186 aaPredicted RBP12.46□□□□□ -0.41
CUX1-207ENST00000465461 NDST1P52848 882 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 CYP27A1Q02318 531 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 MDH1BQ5I0G3 518 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 FAM171BQ6P995 826 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 GET4Q7L5D6 327 aaPredicted RBP12.46□□□□□ -0.41
CUX1-207ENST00000465461 ADHFE1Q8IWW8 467 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 ITFG1Q8TB96 612 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 TAF4BQ92750 862 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.41
CUX1-207ENST00000465461 MYLPFQ96A32 169 aa12.46□□□□□ -0.41
CUX1-207ENST00000465461 ARID3AQ99856 593 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms