RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-208ENST00000465245 STK24Q9Y6E0 443 aa13.06□□□□□ -0.32
TRA2B-208ENST00000465245 LNP1A1A4G5 178 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 BCLAF3A2AJT9 711 aaKnown RBP13.05□□□□□ -0.32
TRA2B-208ENST00000465245 OTOL1A6NHN0 477 aaPredicted RBP13.05□□□□□ -0.32
TRA2B-208ENST00000465245 PPEF2O14830 753 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 DCLK1O15075 740 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 ATF6P18850 670 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 DRD1P21728 446 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 GBP1P32455 592 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 AVPR1AP37288 418 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 CDR1P51861 262 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 AMPD2Q01433 879 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 BFSP1Q12934 665 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 ACAP1Q15027 740 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 ZBTB6Q15916 424 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 SLC39A12Q504Y0 691 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 SH3PXD2AQ5TCZ1 1133 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 ZPBP2Q6X784 338 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 OR10T2Q8NGX3 314 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 RPLP0P6Q8NHW5 317 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 CHFRQ96EP1 664 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 BICD1Q96G01 975 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 IL21Q9HBE4 155 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 ZMYM5Q9UJ78 669 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 CCL26Q9Y258 94 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 LAMA5O15230 3695 aa13.05□□□□□ -0.32
TRA2B-208ENST00000465245 ITPR1Q14643 2758 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 FREM2Q5SZK8 3169 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 HELZP42694 1942 aaKnown RBP13.04□□□□□ -0.32
TRA2B-208ENST00000465245 TMEM8BA6NDV4 472 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 APBB3O95704 486 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 MAPTP10636 758 aaKnown RBP13.04□□□□□ -0.32
TRA2B-208ENST00000465245 ARSAP15289 507 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 NMT1P30419 496 aaKnown RBP13.04□□□□□ -0.32
TRA2B-208ENST00000465245 TNFSF9P41273 254 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 SMTNP53814 917 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 LILRA4P59901 499 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 RAD51AP2Q09MP3 1159 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 DMC1Q14565 340 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 NBR1Q14596 966 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 FBXO43Q4G163 708 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 C1orf186Q6ZWK4 172 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 MAB21L3Q8N8X9 362 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 IGSF22Q8N9C0 903 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 TMEM161BQ8NDZ6 487 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 GIPC2Q8TF65 315 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 ACDQ96AP0 544 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 SENP8Q96LD8 212 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 P2RY13Q9BPV8 354 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 NTPCRQ9BSD7 190 aaKnown RBP13.04□□□□□ -0.32
TRA2B-208ENST00000465245 TIPINQ9BVW5 301 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 TMEM121BQ9BXQ6 578 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-208ENST00000465245 HAPLN2Q9GZV7 340 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 FOXP1Q9H334 677 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-208ENST00000465245 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 FBRSL1Q9HCM7 1045 aaKnown RBP13.04□□□□□ -0.32
TRA2B-208ENST00000465245 TMEM9BQ9NQ34 198 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 WASF3Q9UPY6 502 aa13.04□□□□□ -0.32
TRA2B-208ENST00000465245 ASCC3Q8N3C0 2202 aaKnown RBP13.04□□□□□ -0.32
TRA2B-208ENST00000465245 PTPRDP23468 1912 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 PP2D1A8MPX8 630 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 TOP3BO95985 862 aaKnown RBP13.03□□□□□ -0.32
TRA2B-208ENST00000465245 PLS3P13797 630 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 GUCY2CP25092 1073 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 U2AF2P26368 475 aaKnown RBP eCLIP13.03□□□□□ -0.321e-15■□□□□ 8.6
TRA2B-208ENST00000465245 DGKEP52429 567 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 ANAPC15P60006 121 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
TRA2B-208ENST00000465245 PDIA5Q14554 519 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 KRT79Q5XKE5 535 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 NAIF1Q69YI7 327 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-208ENST00000465245 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-208ENST00000465245 SYT13Q7L8C5 426 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 KCNK18Q7Z418 384 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 C4orf32Q8N8J7 132 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 SPIRE2Q8WWL2 714 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
TRA2B-208ENST00000465245 SCNM1Q9BWG6 230 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
TRA2B-208ENST00000465245 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
TRA2B-208ENST00000465245 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.32
TRA2B-208ENST00000465245 ANAPC1Q9H1A4 1944 aa13.02□□□□□ -0.32
TRA2B-208ENST00000465245 KHNYNO15037 678 aaKnown RBP13.02□□□□□ -0.33
TRA2B-208ENST00000465245 CYP11A1P05108 521 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 CEACAM1P13688 526 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 PAX3P23760 479 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRA2B-208ENST00000465245 GJA4P35212 333 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 TRAPPC10P48553 1259 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 GALK1P51570 392 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 NLRP12P59046 1061 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 PSMD2Q13200 908 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
TRA2B-208ENST00000465245 PDGFRLQ15198 375 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 ENOX2Q16206 610 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 420.5 ms