RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 USP3Q9Y6I4 520 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SCINQ9Y6U3 715 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 COL5A3P25940 1745 aaPredicted RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 GAKO14976 1311 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 UMODL1Q5DID0 1318 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 FRMPD2Q68DX3 1309 aaPredicted RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 IGKV6D-41A0A0C4DH26 115 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NPHP3-ACAD11A0A0J9YXS1 232 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 SMIM31A0A1B0GVY4 71 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 A6NJY4 79 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 FOXN3O00409 490 aaPredicted RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 EML1O00423 815 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 CDK2AP1O14519 115 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 TGFB1I1O43294 461 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 LRRN2O75325 713 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 CSDE1O75534 798 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 SPAG6O75602 509 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 TJP3O95049 919 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 PSMG1O95456 288 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 PYGMP11217 842 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 ESRRAP11474 423 aaPredicted RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 TARSP26639 723 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 IRS1P35568 1242 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 VAMP7P51809 220 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 CASP5P51878 434 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 ARFIP2P53365 341 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 CACNA2D1P54289 1103 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 MCL1Q07820 350 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NCOA4Q13772 614 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 ITGA9Q13797 1035 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 RCN2Q14257 317 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 TNIP1Q15025 636 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 TMED2Q15363 201 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 UBE2SQ16763 222 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 PTPROQ16827 1216 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 EFHC2Q5JST6 749 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 LGSNQ5TDP6 509 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 SNX30Q5VWJ9 437 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 IZUMO3Q5VZ72 239 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 ACAD10Q6JQN1 1059 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 RINT1Q6NUQ1 792 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 AAGABQ6PD74 315 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 LRRC74BQ6ZQY2 392 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 BRINP3Q76B58 766 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 GSTA5Q7RTV2 222 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 ZNF720Q7Z2F6 126 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NET1Q7Z628 596 aaPredicted RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NOP9Q86U38 636 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 FAM71AQ8IYT1 594 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 ALDH16A1Q8IZ83 802 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 KIRREL3Q8IZU9 778 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 EXD1Q8NHP7 514 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 UHMK1Q8TAS1 419 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 MAML1Q92585 1016 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 KRT35Q92764 455 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 PTPRN2Q92932 1015 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 PPP2R3CQ969Q6 453 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 OPTNQ96CV9 577 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 SCARF2Q96GP6 870 aaPredicted RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 VCPIP1Q96JH7 1222 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NT5C1BQ96P26 610 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NIFKQ9BYG3 293 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 DCLK3Q9C098 648 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 KIAA1683Q9H0B3 1180 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 BHMT2Q9H2M3 363 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 RANBP17Q9H2T7 1088 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 Q9H521 79 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NDFIP2Q9NV92 336 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NMRK1Q9NWW6 199 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 CHCHD3Q9NX63 227 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 DDX43Q9NXZ2 648 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 TFCP2L1Q9NZI6 479 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 SAP30BPQ9UHR5 308 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 SERPINB13Q9UIV8 391 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 HAO1Q9UJM8 370 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 PHF24Q9UPV7 400 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 NOD1Q9Y239 953 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 CHKBQ9Y259 395 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 DRG1Q9Y295 367 aaKnown RBP7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 PCDHA1Q9Y5I3 950 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 GMEB1Q9Y692 573 aa7.58□□□□□ -1.2
CLSTN1-204ENST00000464286 SPATA31A5Q5VU36 1347 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 SPATA31A6Q5VVP1 1343 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 SPATA31A7Q8IWB4 1347 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 CNTNAP4Q9C0A0 1308 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 IGSF9BQ9UPX0 1349 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 RBBP6Q7Z6E9 1792 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 IQANK1A0A1B0GTG1 560 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 ARHGEF35A5YM69 484 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 I3L4J1 428 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 CLIC2O15247 247 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 ATP9AO75110 1047 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 PDHA1P08559 390 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 DLATP10515 647 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 HOXD13P35453 343 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 MAP2K3P46734 347 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 CASP4P49662 377 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 MXI1P50539 228 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 CYP2J2P51589 502 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 RAP1GDS1P52306 607 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms