RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 FBXL5Q9UKA1 691 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
NUP58-206ENST00000463407 GHRP10912 638 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 KLRC2P26717 231 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 PSEN2P49810 448 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 MAP3K7CLP57077 242 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 NUDCD3Q8IVD9 361 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 FEZF2Q8TBJ5 459 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 SOX10P56693 466 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 CCDC157Q569K6 752 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 TRMT10CQ7L0Y3 403 aaKnown RBP13.41□□□□□ -0.26
NUP58-206ENST00000463407 IGFLR1Q9H665 355 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 ACTR5Q9H9F9 607 aaPredicted RBP13.41□□□□□ -0.26
NUP58-206ENST00000463407 TRIM10Q9UDY6 481 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 DPP7Q9UHL4 492 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 IPPQ9Y573 584 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 DIAPH2O60879 1101 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 INHBEP58166 350 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 ZRANB3Q5FWF4 1079 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 PTRHD1Q6GMV3 140 aaKnown RBP13.41□□□□□ -0.26
NUP58-206ENST00000463407 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 ATP8B4Q8TF62 1192 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 EPC1Q9H2F5 836 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 FGFR1OP2Q9NVK5 253 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 ZFP69BQ9UJL9 534 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
NUP58-206ENST00000463407 BRAFP15056 766 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 ADCYAP1R1P41586 468 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 LHX1P48742 406 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 RASGRP2Q7LDG7 609 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 CBWD2Q8IUF1 395 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 C4orf19Q8IY42 314 aa13.41□□□□□ -0.26
NUP58-206ENST00000463407 PTPRAP18433 802 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 MDM2Q00987 491 aaPredicted RBP13.4□□□□□ -0.26
NUP58-206ENST00000463407 MDH1BQ5I0G3 518 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 SCFD1Q8WVM8 642 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 ANGPTL2Q9UKU9 493 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 PKP3Q9Y446 797 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 CKBP12277 381 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 RAB27AP51159 221 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 BEX3Q00994 111 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 POLD3Q15054 466 aaPredicted RBP13.4□□□□□ -0.26
NUP58-206ENST00000463407 ELOA2Q8IYF1 753 aaPredicted RBP13.4□□□□□ -0.26
NUP58-206ENST00000463407 UBE2Q2Q8WVN8 375 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 KRT35Q92764 455 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 TGS1Q96RS0 853 aaKnown RBP13.4□□□□□ -0.26
NUP58-206ENST00000463407 IDI2Q9BXS1 227 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 MRPL46Q9H2W6 279 aaKnown RBP13.4□□□□□ -0.26
NUP58-206ENST00000463407 RSAD1Q9HA92 442 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 LATS2Q9NRM7 1088 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 ZNF263O14978 683 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 ADCY3O60266 1144 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 EPHB2P29323 1055 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 SFSWAPQ12872 951 aaKnown RBP13.4□□□□□ -0.26
NUP58-206ENST00000463407 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 RABGAP1LQ5R372 815 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 LCA5Q86VQ0 697 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 CCDC138Q96M89 665 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 LRRC1Q9BTT6 524 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
NUP58-206ENST00000463407 DDX5P17844 614 aaKnown RBP13.4□□□□□ -0.26
NUP58-206ENST00000463407 HMOX2P30519 316 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 AVPR1AP37288 418 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 MORF4L2Q15014 288 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 ITIH5Q86UX2 942 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 CGRRF1Q99675 332 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 FAM118BQ9BPY3 351 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 PPFIA2O75334 1257 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 CASP4P49662 377 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 AGR3Q8TD06 166 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
NUP58-206ENST00000463407 TARSL2A2RTX5 802 aaKnown RBP13.39□□□□□ -0.27
NUP58-206ENST00000463407 VDRP11473 427 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 GIT2Q14161 759 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 SEC23AQ15436 765 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 TRIM48Q8IWZ4 208 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 REPS2Q8NFH8 660 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 TSPAN17Q96FV3 270 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 TRIM51Q9BSJ1 452 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 EMILIN2Q9BXX0 1053 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 PCDHGB4Q9UN71 923 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 RNASEH1O60930 286 aaKnown RBP13.39□□□□□ -0.27
NUP58-206ENST00000463407 PPP3CCP48454 512 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 EFEMP1Q12805 493 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 EFTUD2Q15029 972 aaKnown RBP eCLIP13.39□□□□□ -0.276e-7■■■■□ 19.5
NUP58-206ENST00000463407 SNX31Q8N9S9 440 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 C20orf96Q9NUD7 363 aaPredicted RBP13.39□□□□□ -0.27
NUP58-206ENST00000463407 ARHGAP23Q9P227 1491 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 CFAP99D6REC4 459 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 AKAP5P24588 427 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 LRRC14Q15048 493 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 ZC3H15Q8WU90 426 aaKnown RBP13.39□□□□□ -0.27
NUP58-206ENST00000463407 KDM4CQ9H3R0 1056 aa13.39□□□□□ -0.27
NUP58-206ENST00000463407 COMTP21964 271 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms