RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SPATA7Q9P0W8 599 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 MTRF1LQ9UGC7 380 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 INTUQ9ULD6 942 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 STXBP5LQ9Y2K9 1186 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 NUB1Q9Y5A7 615 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 ACTL7BQ9Y614 415 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 DOCK5Q9H7D0 1870 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 RASGRF2O14827 1237 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 UPP2O95045 317 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 KLRC1P26715 233 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 TCF7P36402 384 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 PTENP60484 403 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 PURAQ00577 322 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 PTGDRQ13258 359 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 SPIDRQ14159 915 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 GIT2Q14161 759 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 CXCL17Q6UXB2 119 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 MARK2Q7KZI7 788 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 EXOC3L1Q86VI1 746 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 ST13P4Q8IZP2 240 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 RDM1Q8NG50 284 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 PAWRQ96IZ0 340 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 MTMR9Q96QG7 549 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 ZNF184Q99676 751 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 TBC1D10AQ9BXI6 508 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 CCSER1Q9C0I3 900 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 UNC45AQ9H3U1 944 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 OCEL1Q9H607 264 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 TUBA8Q9NY65 449 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 PCDHA12Q9UN75 941 aa12.13□□□□□ -0.47
TRAPPC3-205ENST00000462715 A0A1W2PQ45 241 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 A0A1W2PQY0 241 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 LYNP07948 512 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 GM2AP17900 193 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 PPP2R5CQ13362 524 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 AUHQ13825 339 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 TMEM266Q2M3C6 531 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 PPP1R21Q6ZMI0 780 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 LRRC74BQ6ZQY2 392 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 RGS9BPQ6ZS82 235 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 VSIG1Q86XK7 387 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 LRRC57Q8N9N7 239 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 ZNF398Q8TD17 642 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 VTI1AQ96AJ9 217 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 RNF25Q96BH1 459 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 BRD8Q9H0E9 1235 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 TMEM165Q9HC07 324 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 PCDHA10Q9Y5I2 948 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 GSTTP1A0A1W2PQM5 241 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 A8MXQ7 604 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 CHMP2AO43633 222 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 CCNE2O96020 404 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 LGALS2P05162 132 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 PSAPP07602 524 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 TROVE2P10155 538 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 COL6A1P12109 1028 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 RARGP13631 454 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 TXKP42681 527 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 IFI35P80217 286 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 FAM160B1Q5W0V3 765 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 CENPPQ6IPU0 288 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 PHLDB3Q6NSJ2 640 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 C4orf50Q6ZRC1 276 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 TRMT10CQ7L0Y3 403 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 ECHDC2Q86YB7 292 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 PASD1Q8IV76 773 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 DIS3LQ8TF46 1054 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 NAT14Q8WUY8 206 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 GJA10Q969M2 543 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 SEZ6LQ9BYH1 1024 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 SENP6Q9GZR1 1112 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 EMSYQ7Z589 1322 aa12.12□□□□□ -0.47
TRAPPC3-205ENST00000462715 TCEA3O75764 348 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 ATG7O95352 703 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 F2P00734 622 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 SUPT20HL2P0C7V6 817 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 ZNF286BP0CG31 522 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 HPCAP84074 193 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 STRN3Q13033 797 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 ANKRD40Q6AI12 368 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 ABHD15Q6UXT9 468 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 MAEAQ7L5Y9 396 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 MIER3Q7Z3K6 550 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 STAMQ92783 540 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 GLG1Q92896 1179 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 SLC7A6OSQ96CW6 309 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 RAB34Q9BZG1 259 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 PPP1R12CQ9BZL4 782 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 DDX47Q9H0S4 455 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 SMARCAD1Q9H4L7 1026 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 DENND2DQ9H6A0 471 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 VAV3Q9UKW4 847 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 TRIM33Q9UPN9 1127 aa12.11□□□□□ -0.47
TRAPPC3-205ENST00000462715 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms