RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FOXD4L6Q3SYB3 417 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF394Q53GI3 561 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 NCAPH2Q6IBW4 605 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 KIAA1211LQ6NV74 962 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 SWSAP1Q6NVH7 229 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 FAM173BQ6P4H8 233 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 FOXD4L3Q6VB84 417 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 TAS1R1Q7RTX1 841 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 PLPPR4Q7Z2D5 763 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 GRASPQ7Z6J2 395 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 PROSER1Q86XN7 944 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF295-AS1Q8N0V1 137 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 RDM1Q8NG50 284 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 HNRNPLLQ8WVV9 542 aaKnown RBP6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 FGF13Q92913 245 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 LOXL4Q96JB6 756 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 CDK15Q96Q40 435 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 MTMR9Q96QG7 549 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 RPS6KC1Q96S38 1066 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 KXD1Q9BQD3 176 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 IER2Q9BTL4 223 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 RAB34Q9BZG1 259 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 GBP3Q9H0R5 595 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 PLEKHA4Q9H4M7 779 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 PIF1Q9H611 641 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 PRDM16Q9HAZ2 1276 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 SRA1Q9HD15 236 aaKnown RBP6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF302Q9NR11 478 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 DNAJB4Q9UDY4 337 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 STK39Q9UEW8 545 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 VAV3Q9UKW4 847 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 SSX2IPQ9Y2D8 614 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 ATP6V1DQ9Y5K8 247 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 USP3Q9Y6I4 520 aa6.54□□□□□ -1.36
SMARCC1-204ENST00000462198 ACACAQ13085 2346 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 CDK2AP1O14519 115 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 EIF1AYO14602 144 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 CTIFO43310 598 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 VTNP04004 478 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 PRPHP41219 470 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 NOP2P46087 812 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 RAP1GAPP47736 663 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 SLC26A2P50443 739 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 NTHL1P78549 312 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ATP2C1P98194 919 aaPredicted RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 DHX9Q08211 1270 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 STK38Q15208 465 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 LONRF3Q496Y0 759 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 CT47A1Q5JQC4 288 aaPredicted RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 DAB2IPQ5VWQ8 1189 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 EGFLAMQ63HQ2 1017 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ARL6IP4Q66PJ3 421 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 SDE2Q6IQ49 451 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ABHD15Q6UXT9 468 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 DTHD1Q6ZMT9 781 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 TRMT1LQ7Z2T5 733 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF280BQ86YH2 543 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 CKAP2LQ8IYA6 745 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 C4orf32Q8N8J7 132 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ERMNQ8TAM6 284 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ANKRD7Q92527 254 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 EDEM1Q92611 657 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 LRIG1Q96JA1 1093 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 USP28Q96RU2 1077 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 HNRNPABQ99729 332 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 PLA2G2FQ9BZM2 168 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 DNAJC25Q9H1X3 360 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 DEF6Q9H4E7 631 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 TBC1D13Q9NVG8 400 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ZDHHC7Q9NXF8 308 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 CWC15Q9P013 229 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 GABBR1Q9UBS5 961 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 KLK13Q9UKR3 277 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 CFAP45Q9UL16 551 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 FAN1Q9Y2M0 1017 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 PCDHGB7Q9Y5F8 929 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 HRH3Q9Y5N1 445 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 CLIC4Q9Y696 253 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 URB1O60287 2271 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ZNF462Q96JM2 2506 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 KALRNO60229 2985 aa6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 ASCC3Q8N3C0 2202 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-204ENST00000462198 IGKV6D-21A0A0A0MT36 114 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 SYCE3A1L190 88 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 VWA3AA6NCI4 1184 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 K7ESF4 209 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 TGM5O43548 720 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 HBP1O60381 514 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 DKC1O60832 514 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 DDHD2O94830 711 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 EPN2O95208 641 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 SOD2P04179 222 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 PRB1P04280 392 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 URODP06132 367 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 SLFN14P0C7P3 912 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 CHRNB1P11230 501 aa6.52□□□□□ -1.37
SMARCC1-204ENST00000462198 CSRP1P21291 193 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms