RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 MTM1Q13496 603 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 CMPK2Q5EBM0 449 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 APBB1IPQ7Z5R6 666 aaPredicted RBP19.43■□□□□ 0.7
HPS3-204ENST00000462030 FBXO41Q8TF61 875 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 PRR11Q96HE9 360 aaPredicted RBP19.43■□□□□ 0.7
HPS3-204ENST00000462030 SYT15Q9BQS2 421 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 DCLRE1BQ9H816 532 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 C10orf88Q9H8K7 445 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 ALG13Q9NP73 1137 aaKnown RBP19.43■□□□□ 0.7
HPS3-204ENST00000462030 SAR1AQ9NR31 198 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 SPATS2LQ9NUQ6 558 aaKnown RBP19.43■□□□□ 0.7
HPS3-204ENST00000462030 ARL8BQ9NVJ2 186 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 ANKFY1Q9P2R3 1169 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 SLC17A7Q9P2U7 560 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 SHOC2Q9UQ13 582 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 WDR81Q562E7 1941 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 WDR64B1ANS9 1081 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 SGK1O00141 431 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 C4BPAP04003 597 aaKnown RBP19.43■□□□□ 0.7
HPS3-204ENST00000462030 PTGER2P43116 358 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 CUL2Q13617 745 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 MSS51Q4VC12 460 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 TRIM72Q6ZMU5 477 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 SAMD3Q8N6K7 520 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 TCP10LQ8TDR4 215 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 SYTL5Q8TDW5 730 aaPredicted RBP19.43■□□□□ 0.7
HPS3-204ENST00000462030 SH3TC2Q8TF17 1288 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 SPIRE2Q8WWL2 714 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 PTPRN2Q92932 1015 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 VCPIP1Q96JH7 1222 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 NTPCRQ9BSD7 190 aaKnown RBP19.43■□□□□ 0.7
HPS3-204ENST00000462030 NMRK1Q9NWW6 199 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 IP6K2Q9UHH9 426 aa19.43■□□□□ 0.7
HPS3-204ENST00000462030 A0A0G2JND7 137 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 F8VP50 259 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 KIF3CO14782 793 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 TROVE2P10155 538 aaKnown RBP eCLIP19.42■□□□□ 0.7
HPS3-204ENST00000462030 GARTP22102 1010 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 MRPS35P82673 323 aaKnown RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 RASA2Q15283 850 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 TSNAXIP1Q2TAA8 658 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 MUM1Q2TAK8 710 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 ANKRD22Q5VYY1 191 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 RBBP8NLQ8NC74 664 aaPredicted RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 SPDYE1Q8NFV5 336 aaPredicted RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 CEP170P1Q96L14 293 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 WDR83Q9BRX9 315 aaKnown RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 PARVAQ9NVD7 372 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 hCG_1818297A0A087WSY0 165 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 CFAP69A5D8W1 941 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 ATP2A1O14983 1001 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 ACOT2P49753 483 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 NLRP11P59045 1033 aaKnown RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 PLCB3Q01970 1234 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 OGDHQ02218 1023 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 HIF1AQ16665 826 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 FNBP1LQ5T0N5 605 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 TAB3Q8N5C8 712 aaPredicted RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 MZB1Q8WU39 189 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 FNBP1Q96RU3 617 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 PAFAH2Q99487 392 aa19.42■□□□□ 0.7
HPS3-204ENST00000462030 RPL26L1Q9UNX3 145 aaKnown RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 DRG1Q9Y295 367 aaKnown RBP19.42■□□□□ 0.7
HPS3-204ENST00000462030 JAK3P52333 1124 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 PGM5Q15124 567 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 SEPT7Q16181 437 aaKnown RBP19.41■□□□□ 0.7
HPS3-204ENST00000462030 THEMIS2Q5TEJ8 643 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 ZNF398Q8TD17 642 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 ZBTB10Q96DT7 871 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 ZNF333Q96JL9 665 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 MCEEQ96PE7 176 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 PCDH9Q9HC56 1237 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 SSU72Q9NP77 194 aaKnown RBP19.41■□□□□ 0.7
HPS3-204ENST00000462030 SAE1Q9UBE0 346 aaPredicted RBP19.41■□□□□ 0.7
HPS3-204ENST00000462030 HEY2Q9UBP5 337 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 TMEM191CA6NGB0 347 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 ZNF862O60290 1169 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 HAUS5O94927 633 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 TMEM191BP0C7N4 346 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 RCN1Q15293 331 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 C11orf91Q3C1V1 193 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 SCARA3Q6AZY7 606 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 LRRC6Q86X45 466 aa19.41■□□□□ 0.7
HPS3-204ENST00000462030 PTCD3Q96EY7 689 aaKnown RBP19.41■□□□□ 0.7
HPS3-204ENST00000462030 FARP1Q9Y4F1 1045 aaPredicted RBP19.41■□□□□ 0.7
HPS3-204ENST00000462030 ARID2Q68CP9 1835 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 TESPA1A2RU30 521 aaPredicted RBP19.4■□□□□ 0.7
HPS3-204ENST00000462030 LRRD1A4D1F6 860 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 NVLO15381 856 aaKnown RBP19.4■□□□□ 0.7
HPS3-204ENST00000462030 ZBED4O75132 1171 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 KRT36O76013 467 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 GDF10P55107 478 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 CLDN10P78369 228 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 MCL1Q07820 350 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 KLC1Q07866 573 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 PSMD6Q15008 389 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 TMEM154Q6P9G4 183 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 NRG4Q8WWG1 115 aa19.4■□□□□ 0.7
HPS3-204ENST00000462030 BTBD10Q9BSF8 475 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms