RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 CACTINQ8WUQ7 758 aaKnown RBP19.27■□□□□ 0.68
SSB-206ENST00000461708 SEPT5Q99719 369 aaPredicted RBP19.27■□□□□ 0.68
SSB-206ENST00000461708 HINFPQ9BQA5 517 aa19.27■□□□□ 0.68
SSB-206ENST00000461708 FAM213AQ9BRX8 229 aa19.27■□□□□ 0.68
SSB-206ENST00000461708 IKZF4Q9H2S9 585 aa19.27■□□□□ 0.68
SSB-206ENST00000461708 ZSCAN16Q9H4T2 348 aaPredicted RBP19.27■□□□□ 0.68
SSB-206ENST00000461708 IL21Q9HBE4 155 aa19.27■□□□□ 0.68
SSB-206ENST00000461708 NCOR2Q9Y618 2525 aa19.27■□□□□ 0.68
SSB-206ENST00000461708 DENND4CQ5VZ89 1909 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 MYBPHLA2RUH7 354 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 DPYSL4O14531 572 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 SOAT2O75908 522 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 CCNE1P24864 410 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 LRRC32Q14392 662 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 NFE2Q16621 373 aaPredicted RBP19.26■□□□□ 0.67
SSB-206ENST00000461708 LRRC52Q8N7C0 313 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 FAM200AQ8TCP9 573 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 LRRC3BQ96PB8 259 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 GCNAQ96QF7 691 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 TMEM206Q9H813 350 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 MTMR6Q9Y217 621 aa19.26■□□□□ 0.67
SSB-206ENST00000461708 KIAA0391O15091 583 aaKnown RBP19.25■□□□□ 0.67
SSB-206ENST00000461708 PAPSS2O95340 614 aaPredicted RBP19.25■□□□□ 0.67
SSB-206ENST00000461708 GCNT3O95395 438 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 STAT6P42226 847 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 NASPP49321 788 aaPredicted RBP19.25■□□□□ 0.67
SSB-206ENST00000461708 DGKKQ5KSL6 1271 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 FAM173BQ6P4H8 233 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 TSSK4Q6SA08 328 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 TMEM86AQ8N2M4 240 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 SPEM1Q8N4L4 309 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 DCLK2Q8N568 766 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 LEO1Q8WVC0 666 aaPredicted RBP19.25■□□□□ 0.67
SSB-206ENST00000461708 SECISBP2LQ93073 1101 aaKnown RBP19.25■□□□□ 0.67
SSB-206ENST00000461708 RMDN1Q96DB5 314 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 USP28Q96RU2 1077 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 LPIN3Q9BQK8 851 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 ABCB6Q9NP58 842 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 RBAKQ9NYW8 714 aaPredicted RBP19.25■□□□□ 0.67
SSB-206ENST00000461708 NCDNQ9UBB6 729 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 ITGA11Q9UKX5 1188 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 SMG5Q9UPR3 1016 aaKnown RBP19.25■□□□□ 0.67
SSB-206ENST00000461708 PCDHB5Q9Y5E4 795 aa19.25■□□□□ 0.67
SSB-206ENST00000461708 EXTL3O43909 919 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 IDEP14735 1019 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 CASP5P51878 434 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 KPNA1P52294 538 aaPredicted RBP19.24■□□□□ 0.67
SSB-206ENST00000461708 TFAMQ00059 246 aaKnown RBP19.24■□□□□ 0.67
SSB-206ENST00000461708 TSPY1Q01534 308 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 CEBPZQ03701 1054 aaKnown RBP19.24■□□□□ 0.67
SSB-206ENST00000461708 TAF12Q16514 161 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 SYCP3Q8IZU3 236 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 SYNPOQ8N3V7 929 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 CELF5Q8N6W0 485 aaKnown RBP19.24■□□□□ 0.67
SSB-206ENST00000461708 C1orf127Q8N9H9 656 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 CXorf38Q8TB03 319 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 BPIFB1Q8TDL5 484 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 ACBD6Q9BR61 282 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 LRRC27Q9C0I9 530 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 PANK4Q9NVE7 773 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 THG1LQ9NWX6 298 aaKnown RBP19.24■□□□□ 0.67
SSB-206ENST00000461708 GDAP2Q9NXN4 497 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 DLL3Q9NYJ7 618 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 TBC1D7Q9P0N9 293 aa19.24■□□□□ 0.67
SSB-206ENST00000461708 KIF26AQ9ULI4 1882 aaPredicted RBP19.24■□□□□ 0.67
SSB-206ENST00000461708 SLC38A8A6NNN8 435 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 SPECC1L-ADORA2AF8WAN1 911 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 PRAMEF12O95522 483 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 HMGA1P17096 107 aaKnown RBP19.23■□□□□ 0.67
SSB-206ENST00000461708 DDX6P26196 483 aaKnown RBP eCLIP19.23■□□□□ 0.679e-6■□□□□ 10.1
SSB-206ENST00000461708 POLR2BP30876 1174 aaKnown RBP19.23■□□□□ 0.67
SSB-206ENST00000461708 CTHP32929 405 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 CXCL12P48061 93 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 PUM1Q14671 1186 aaKnown RBP eCLIP19.23■□□□□ 0.67
SSB-206ENST00000461708 STXBP4Q6ZWJ1 553 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 PDCL2Q8N4E4 241 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 SAAL1Q96ER3 474 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 SLC46A2Q9BY10 475 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 ABI2Q9NYB9 513 aaPredicted RBP19.23■□□□□ 0.67
SSB-206ENST00000461708 AGAP1Q9UPQ3 857 aa19.23■□□□□ 0.67
SSB-206ENST00000461708 A0A087X0B3 334 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 HUS1O60921 280 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 ITGB3P05106 788 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 SDHBP21912 280 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 WNT7BP56706 349 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 GAS6Q14393 721 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 TMEM150AQ86TG1 271 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 CCDC65Q8IXS2 484 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 CMTM8Q8IZV2 173 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 TOP6BLQ8N6T0 577 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 CBWD1Q9BRT8 395 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 TNMDQ9H2S6 317 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 CUEDC2Q9H467 287 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 L1RE1Q9UN81 338 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 SPTBN2O15020 2390 aa19.22■□□□□ 0.67
SSB-206ENST00000461708 ZNF638Q14966 1978 aaKnown RBP19.21■□□□□ 0.67
SSB-206ENST00000461708 STX6O43752 255 aa19.21■□□□□ 0.67
SSB-206ENST00000461708 F11P03951 625 aa19.21■□□□□ 0.67
SSB-206ENST00000461708 CSH1P0DML2 217 aa19.21■□□□□ 0.67
SSB-206ENST00000461708 CSH2P0DML3 217 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms