RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 PTGIRP43119 386 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 OTUD4Q01804 1114 aaKnown RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 ZNF568Q3ZCX4 644 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 PPIL6Q8IXY8 311 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 ST13P4Q8IZP2 240 aaPredicted RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 TMC2Q8TDI7 906 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 RMDN2Q96LZ7 410 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 MOV10L1Q9BXT6 1211 aaKnown RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 RPF1Q9H9Y2 349 aaKnown RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 ASNSD1Q9NWL6 643 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 FAM198AQ9UFP1 575 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 R3HDM2Q9Y2K5 976 aaKnown RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 TRIM49D1C9J1S8 452 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 POLRMTO00411 1230 aaKnown RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 DNALI1O14645 258 aaPredicted RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 KCNN4O15554 427 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 CYP1A2P05177 515 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 RPA3P35244 121 aaPredicted RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 EAPPQ56P03 285 aaPredicted RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 SLC9A9Q8IVB4 645 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 TEX9Q8N6V9 391 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 MTBPQ96DY7 904 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 KIAA1683Q9H0B3 1180 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 ZC3H7BQ9UGR2 993 aaKnown RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 NUP188Q5SRE5 1749 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 TRPA1O75762 1119 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 GRAP2O75791 330 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 PTPN4P29074 926 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 HOXD13P35453 343 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 ARL1P40616 181 aaPredicted RBP15.17■□□□□ 0.02
NCL-207ENST00000461347 ASPHQ12797 758 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 RABGAP1LQ5R372 815 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 TCP10LQ8TDR4 215 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 PCMTD2Q9NV79 361 aa15.17■□□□□ 0.02
NCL-207ENST00000461347 ENTPD5O75356 428 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 VIL1P09327 827 aaKnown RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 SERPINB4P48594 390 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 MORF4L2Q15014 288 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 SPRED3Q2MJR0 410 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 DCAF15Q66K64 600 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 DNAAF3Q8N9W5 541 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 PIP4K2CQ8TBX8 421 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 MIPOL1Q8TD10 442 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 SEMA4DQ92854 862 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 TBC1D10AQ9BXI6 508 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 VPS11Q9H270 941 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 QTRT2Q9H974 415 aaKnown RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 RNPEPL1Q9HAU8 725 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 ZNF70Q9UC06 446 aaPredicted RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 AGAP1Q9UPQ3 857 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 MTO1Q9Y2Z2 717 aaKnown RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 CALB2P22676 271 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 ECHS1P30084 290 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 EMC2Q15006 297 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 XKR3Q5GH77 459 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 TFDP3Q5H9I0 405 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 SPOCD1Q6ZMY3 1216 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 SPATA24Q86W54 205 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 CDR2LQ86X02 465 aaPredicted RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 AGR3Q8TD06 166 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 STK32AQ8WU08 396 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 ZNF317Q96PQ6 595 aaPredicted RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 RPAP3Q9H6T3 665 aaPredicted RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 TRPC5Q9UL62 973 aaPredicted RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 COL14A1Q05707 1796 aaKnown RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 MYL2P10916 166 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 COG7P83436 770 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.16■□□□□ 0.024e-77■■■■□ 23.3
NCL-207ENST00000461347 RAPH1Q70E73 1250 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 PIGWQ7Z7B1 504 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 FAM151AQ8WW52 585 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 ZNF75CPQ92670 426 aaPredicted RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 RNF34Q969K3 372 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 SHCBP1LQ9BZQ2 653 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 PPCSQ9HAB8 311 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 ZNF277Q9NRM2 450 aaPredicted RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 SAE1Q9UBE0 346 aaPredicted RBP15.16■□□□□ 0.02
NCL-207ENST00000461347 IVNS1ABPQ9Y6Y0 642 aa15.16■□□□□ 0.02
NCL-207ENST00000461347 GARSP41250 739 aaKnown RBP15.15■□□□□ 0.02
NCL-207ENST00000461347 MTMR2Q13614 643 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 MFSD5Q6N075 450 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 BZW1Q7L1Q6 419 aaKnown RBP15.15■□□□□ 0.02
NCL-207ENST00000461347 RASSF3Q86WH2 238 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 ICAM1P05362 532 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 GPC3P51654 580 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 TAP1Q03518 808 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 SURF1Q15526 300 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 SLC15A2Q16348 729 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 ABRAQ8N0Z2 381 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 EMC1Q8N766 993 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 CENPKQ9BS16 269 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 APOL6Q9BWW8 343 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 FHDC1Q9C0D6 1143 aaPredicted RBP15.15■□□□□ 0.02
NCL-207ENST00000461347 Q9H521 79 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 AGO4Q9HCK5 861 aaKnown RBP15.15■□□□□ 0.02
NCL-207ENST00000461347 FBXO40Q9UH90 709 aa15.15■□□□□ 0.02
NCL-207ENST00000461347 MYO5AQ9Y4I1 1855 aaKnown RBP15.15■□□□□ 0.02
NCL-207ENST00000461347 ZCCHC18P0CG32 403 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms