RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TRIM51Q9BSJ1 452 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 JPH1Q9HDC5 661 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 KCND2Q9NZV8 630 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CCT8L1PA6NM43 557 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CNOT3O75175 753 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ANXA9O76027 345 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 GUCY1A2P33402 732 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 PTPN7P35236 360 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 FDFT1P37268 417 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 VSNL1P62760 191 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 BTKQ06187 659 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 QRICH1Q2TAL8 776 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 TBC1D10CQ8IV04 446 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 SLC25A41Q8N5S1 370 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 MCEEQ96PE7 176 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 THUMPD3Q9BV44 507 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 MOV10L1Q9BXT6 1211 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 SPRTNQ9H040 489 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 COPS7BQ9H9Q2 264 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 PIM2Q9P1W9 311 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 TRMT6Q9UJA5 497 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 DBR1Q9UK59 544 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ITIH6Q6UXX5 1313 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CENPXA8MT69 81 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 DGAT1O75907 488 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 MLH1P40692 756 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 SNRPFP62306 86 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 COX10Q12887 443 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 TOB2Q14106 344 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 EFHC1Q5JVL4 640 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 AGAP9Q5VTM2 703 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CYFIP1Q7L576 1253 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF438Q7Z4V0 828 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 PPIL6Q8IXY8 311 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ADGRF4Q8IZF3 695 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 RBBP8NLQ8NC74 664 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 C3orf20Q8ND61 904 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 HIC2Q96JB3 615 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ZFYVE1Q9HBF4 777 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 HERC5Q9UII4 1024 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 SNX9Q9Y5X1 595 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 MROH7-TTC4A0A0A0MT08 1334 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 PHF20L1A8MW92 1017 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 TEX33O43247 280 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 DGKIO75912 1065 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 PCSK1P29120 753 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 MCAMP43121 646 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ERFP50548 548 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 STAT5BP51692 787 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 GEMIN4P57678 1058 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ATP2C1P98194 919 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 C1DQ13901 141 aaKnown RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 TKFCQ3LXA3 575 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ALFQ53S48 1182 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 C11orf74Q86VG3 221 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 ZNF677Q86XU0 584 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 IPMKQ8NFU5 416 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 FRMD8P1Q9BZ68 369 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CXorf56Q9H5V9 222 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 RGS18Q9NS28 235 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 DLGAP2Q9P1A6 1054 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 MBD2Q9UBB5 411 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 GTF2A1LQ9UNN4 478 aa9.36□□□□□ -0.91
BRCA1-205ENST00000461221 THRAP10827 490 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 GPD1P21695 349 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 PWP1Q13610 501 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 CYP51A1Q16850 503 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 C3orf62Q6ZUJ4 267 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 NEK10Q6ZWH5 1172 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 C11orf96Q7Z7L8 435 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 TMEM117Q9H0C3 514 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 ILKAPQ9H0C8 392 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 SERHL2Q9H4I8 314 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 SERHLQ9NQF3 203 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 NUP153P49790 1475 aaKnown RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 TMEM120BA0PK00 339 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 E9PBE3 544 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 BIRC5O15392 142 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 CYP2D6P10635 497 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 PSMC3P17980 439 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 SSTR3P32745 418 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 PTGER2P43116 358 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 MAGEA10P43363 369 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 HARS2P49590 506 aaKnown RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 NUDT2P50583 147 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 CDC16Q13042 620 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 ARHGAP15Q53QZ3 475 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 XKR3Q5GH77 459 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 OXER1Q8TDS5 423 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 CINPQ9BW66 212 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 RAD21L1Q9H4I0 556 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 LY9Q9HBG7 655 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 GLRA3O75311 464 aa9.35□□□□□ -0.91
BRCA1-205ENST00000461221 MTRF1O75570 445 aaKnown RBP9.35□□□□□ -0.91
BRCA1-205ENST00000461221 HMBSP08397 361 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms