RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 MYO9BQ13459 2157 aa10.86□□□□□ -0.67
UPF2-204ENST00000460569 LAMA3Q16787 3333 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 OR6C75A6NL08 312 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 F8VZ95 297 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 FSCN2O14926 492 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 TPM1P09493 284 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 CPB1P15086 417 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 ACO1P21399 889 aaKnown RBP10.85□□□□□ -0.67
UPF2-204ENST00000460569 LMO2P25791 158 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 IRS1P35568 1242 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 ARPP19P56211 112 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 PSMC1P62191 440 aaKnown RBP10.85□□□□□ -0.67
UPF2-204ENST00000460569 TSPY1Q01534 308 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 CREMQ03060 361 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 CAMK1Q14012 370 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 TRIM14Q14142 442 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 MRPL58Q14197 206 aaKnown RBP10.85□□□□□ -0.67
UPF2-204ENST00000460569 PTPROQ16827 1216 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 FIGNQ5HY92 759 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 PPFIBP1Q86W92 1011 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 UNC93AQ86WB7 457 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 DRC7Q8IY82 874 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 GPR65Q8IYL9 337 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 OR10T2Q8NGX3 314 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 CPLX3Q8WVH0 158 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 IQCDQ96DY2 449 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 TNIP3Q96KP6 325 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 TWNKQ96RR1 684 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 TMEM209Q96SK2 561 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 NT5C1AQ9BXI3 368 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 STK33Q9BYT3 514 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 TTYH3Q9C0H2 523 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 ELOVL4Q9GZR5 314 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 DNAI2Q9GZS0 605 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 DPEP3Q9H4B8 488 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 NGRNQ9NPE2 291 aaKnown RBP10.85□□□□□ -0.67
UPF2-204ENST00000460569 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.85□□□□□ -0.67
UPF2-204ENST00000460569 CDH9Q9ULB4 789 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 NME7Q9Y5B8 376 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 BACE2Q9Y5Z0 518 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 CDY1Q9Y6F8 540 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 CHD9Q3L8U1 2897 aa10.85□□□□□ -0.67
UPF2-204ENST00000460569 PTPRDP23468 1912 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 A0A1W2PQJ5 194 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 C2orf71A6NGG8 1288 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 HIDE1A8MVS5 230 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 FOXN3O00409 490 aaPredicted RBP10.84□□□□□ -0.67
UPF2-204ENST00000460569 ADAM12O43184 909 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 GYPCP04921 128 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 OR4Q2P0C623 313 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 CD19P15391 556 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 CDC25BP30305 580 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 OR1D2P34982 312 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 STAT1P42224 750 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 NDUFV1P49821 464 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 RAD23BP54727 409 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 JAM2P57087 298 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 CCDC142Q17RM4 750 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 MDH1BQ5I0G3 518 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 INTS6LQ5JSJ4 861 aaKnown RBP10.84□□□□□ -0.67
UPF2-204ENST00000460569 HABP4Q5JVS0 413 aaKnown RBP10.84□□□□□ -0.67
UPF2-204ENST00000460569 PDE12Q6L8Q7 609 aaKnown RBP10.84□□□□□ -0.67
UPF2-204ENST00000460569 RSPO2Q6UXX9 243 aaPredicted RBP10.84□□□□□ -0.67
UPF2-204ENST00000460569 ACOT1Q86TX2 421 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 B3GALNT2Q8NCR0 500 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 WHAMMQ8TF30 809 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 MRPL38Q96DV4 380 aaKnown RBP10.84□□□□□ -0.67
UPF2-204ENST00000460569 FAM161BQ96MY7 647 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 ACBD6Q9BR61 282 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 EMILIN2Q9BXX0 1053 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 OXCT2Q9BYC2 517 aaPredicted RBP10.84□□□□□ -0.67
UPF2-204ENST00000460569 EDEM3Q9BZQ6 932 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 GPR88Q9GZN0 384 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 RXFP1Q9HBX9 757 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 FNIP2Q9P278 1114 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 MYH10P35580 1976 aa10.84□□□□□ -0.67
UPF2-204ENST00000460569 LAMA2P24043 3122 aaKnown RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 MYO7AQ13402 2215 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 LRRC53A6NM62 1247 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 RNF225M0QZC1 329 aaPredicted RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 TEX28O15482 410 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 TBC1D4O60343 1298 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 LILRB3O75022 631 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 ATP2C2O75185 946 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 GFPT2O94808 682 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 ADH1AP07327 375 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 CNPP09543 421 aaKnown RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 PTPN1P18031 435 aaKnown RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 CASP14P31944 242 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 SOX5P35711 763 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
UPF2-204ENST00000460569 CDR1P51861 262 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 ZNF132P52740 706 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 ROR1Q01973 937 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 GRIN2CQ14957 1233 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 SLC39A12Q504Y0 691 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 SLC8B1Q6J4K2 584 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms