RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 BTBD6Q96KE9 485 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 CASD1Q96PB1 797 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 TMEM209Q96SK2 561 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 TMEM30AQ9NV96 361 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 SEPT11Q9NVA2 429 aaKnown RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 TBC1D13Q9NVG8 400 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 DNAI1Q9UI46 699 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 HYOU1Q9Y4L1 999 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 PTPRDP23468 1912 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 TCRBV5S1A1TA0A578 114 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 DCDC2CA8MYV0 355 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 O00370 1275 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 TLR3O15455 904 aaKnown RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 ZSCAN12O43309 604 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 FTLP02792 175 aaPredicted RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 ATP1A1P05023 1023 aaKnown RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 RPLP2P05387 115 aaKnown RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 CSF2RAP15509 400 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 RAB27AP51159 221 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 PDE6CP51160 858 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 BCAR1P56945 870 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 GNG11P61952 73 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 PSMC1P62191 440 aaKnown RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 AMPD2Q01433 879 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 UPP1Q16831 310 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 SLC24A5Q71RS6 500 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 MON1BQ7L1V2 547 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 APBB1IPQ7Z5R6 666 aaPredicted RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 ACOT1Q86TX2 421 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 COLGALT2Q8IYK4 626 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 ZNF592Q92610 1267 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 PIWIL1Q96J94 861 aaKnown RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 MMS19Q96T76 1030 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 ISCUQ9H1K1 167 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 PRDM5Q9NQX1 630 aaPredicted RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 FAM49BQ9NUQ9 324 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 TMEM39AQ9NV64 488 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 MARCH5Q9NX47 278 aa9.31□□□□□ -0.92
RIF1-208ENST00000457745 PUF60Q9UHX1 559 aaKnown RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 PACSIN2Q9UNF0 486 aaPredicted RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 BZW2Q9Y6E2 419 aaKnown RBP9.31□□□□□ -0.92
RIF1-208ENST00000457745 KPNA7A9QM74 516 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 ENC1O14682 589 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 KIAA0355O15063 1070 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 NRDCO43847 1150 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 MICAL2O94851 1124 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 THP07101 528 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 PDGFRBP09619 1106 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 H2AFZP0C0S5 128 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 CCDC130P13994 396 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 CD19P15391 556 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 RRM1P23921 792 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 AARSP49588 968 aaKnown RBP eCLIP9.3□□□□□ -0.92
RIF1-208ENST00000457745 TAF6P49848 677 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 CACNA2D1P54289 1103 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 TNNC1P63316 161 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 KRT83P78385 493 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 GRIK3Q13003 919 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 HSP90AA2PQ14568 343 aaPredicted RBP9.3□□□□□ -0.92
RIF1-208ENST00000457745 SPA17Q15506 151 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 PTPN20Q4JDL3 420 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 PKDCCQ504Y2 493 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 DAB2IPQ5VWQ8 1189 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 ACAD10Q6JQN1 1059 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 TRNP1Q6NT89 227 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 MMS22LQ6ZRQ5 1243 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 PAQR9Q6ZVX9 377 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 H2AFVQ71UI9 128 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 TTC30AQ86WT1 665 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 LRRC57Q8N9N7 239 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 UBA3Q8TBC4 463 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 KCNV2Q8TDN2 545 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 TSC1Q92574 1164 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 SEPT8Q92599 483 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 B3GALT6Q96L58 329 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 SENP8Q96LD8 212 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 RPS6KC1Q96S38 1066 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 C11orf70Q9BRQ4 267 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 VN1R3Q9BXE9 311 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 RHOBTB2Q9BYZ6 727 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 IMPG2Q9BZV3 1241 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 NRDE2Q9H7Z3 1164 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 CYP3A43Q9HB55 503 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 CRTAC1Q9NQ79 661 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 TMLHEQ9NVH6 421 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 TMEM161AQ9NX61 479 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 GDAP2Q9NXN4 497 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 SMARCAL1Q9NZC9 954 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 EHD2Q9NZN4 543 aa9.3□□□□□ -0.92
RIF1-208ENST00000457745 BARX2Q9UMQ3 279 aaPredicted RBP9.3□□□□□ -0.92
RIF1-208ENST00000457745 PIK3R2O00459 728 aa9.29□□□□□ -0.92
RIF1-208ENST00000457745 CLDN5O00501 218 aa9.29□□□□□ -0.92
RIF1-208ENST00000457745 CYB561D2O14569 222 aa9.29□□□□□ -0.92
RIF1-208ENST00000457745 SRGAP2O75044 1071 aa9.29□□□□□ -0.92
RIF1-208ENST00000457745 PALMO75781 387 aa9.29□□□□□ -0.92
RIF1-208ENST00000457745 FTCDO95954 541 aa9.29□□□□□ -0.92
RIF1-208ENST00000457745 ERBB2P04626 1255 aa9.29□□□□□ -0.92
RIF1-208ENST00000457745 CYP1A2P05177 515 aa9.29□□□□□ -0.92
RIF1-208ENST00000457745 TMEM253P0C7T8 217 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms