RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ASGR2P07307 311 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 PRCPP42785 496 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 CASP4P49662 377 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 VAMP7P51809 220 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 MAPRE1Q15691 268 aaKnown RBP24.84■■□□□ 1.57
CBX3-204ENST00000456948 SOWAHAQ2M3V2 549 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 FAM186BQ8IYM0 893 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 ZNF516Q92618 1163 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 FAM84AQ96KN4 292 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 TMEM209Q96SK2 561 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 SEPT5Q99719 369 aaPredicted RBP24.84■■□□□ 1.57
CBX3-204ENST00000456948 RTP3Q9BQQ7 232 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 MKNK1Q9BUB5 465 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 SNX25Q9H3E2 840 aa24.84■■□□□ 1.57
CBX3-204ENST00000456948 LRRIQ3A6PVS8 624 aaPredicted RBP24.83■■□□□ 1.57
CBX3-204ENST00000456948 N4BP1O75113 896 aaKnown RBP24.83■■□□□ 1.57
CBX3-204ENST00000456948 EPB41P11171 864 aaKnown RBP24.83■■□□□ 1.57
CBX3-204ENST00000456948 NCOA4Q13772 614 aa24.83■■□□□ 1.57
CBX3-204ENST00000456948 SGSM1Q2NKQ1 1148 aa24.83■■□□□ 1.57
CBX3-204ENST00000456948 SMYD4Q8IYR2 804 aaPredicted RBP24.83■■□□□ 1.57
CBX3-204ENST00000456948 IMPG2Q9BZV3 1241 aa24.83■■□□□ 1.57
CBX3-204ENST00000456948 ABI2Q9NYB9 513 aaPredicted RBP24.83■■□□□ 1.57
CBX3-204ENST00000456948 DOCK6Q96HP0 2047 aa24.83■■□□□ 1.56
CBX3-204ENST00000456948 GABRDO14764 452 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 STX10O60499 249 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 GNL1P36915 607 aaPredicted RBP24.82■■□□□ 1.56
CBX3-204ENST00000456948 LRRC63Q05C16 580 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 ZNF699Q32M78 642 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 INTS6LQ5JSJ4 861 aaKnown RBP24.82■■□□□ 1.56
CBX3-204ENST00000456948 CCDC150Q8NCX0 1101 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 ITFG1Q8TB96 612 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 TAF4BQ92750 862 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 DHTKD1Q96HY7 919 aaPredicted RBP24.82■■□□□ 1.56
CBX3-204ENST00000456948 GPR88Q9GZN0 384 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 ABCB6Q9NP58 842 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 NXF1Q9UBU9 619 aaKnown RBP24.82■■□□□ 1.56
CBX3-204ENST00000456948 CDH9Q9ULB4 789 aa24.82■■□□□ 1.56
CBX3-204ENST00000456948 TMEM221A6NGB7 291 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 M0R296 226 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 TACC1O75410 805 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 AKAP3O75969 853 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 C4BPAP04003 597 aaKnown RBP24.81■■□□□ 1.56
CBX3-204ENST00000456948 MYL4P12829 197 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 WARSP23381 471 aaKnown RBP24.81■■□□□ 1.56
CBX3-204ENST00000456948 MYL6P60660 151 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 FKBP3Q00688 224 aaKnown RBP24.81■■□□□ 1.56
CBX3-204ENST00000456948 ZNF667Q5HYK9 610 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 C4orf50Q6ZRC1 276 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 HFE2Q6ZVN8 426 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 SPATA2LQ8IUW3 424 aaPredicted RBP24.81■■□□□ 1.56
CBX3-204ENST00000456948 VRTNQ9H8Y1 702 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 CEP72Q9P209 647 aa24.81■■□□□ 1.56
CBX3-204ENST00000456948 TRIOO75962 3097 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 TRIM21P19474 475 aaKnown RBP24.8■■□□□ 1.56
CBX3-204ENST00000456948 RPL10AP62906 217 aaKnown RBP24.8■■□□□ 1.56
CBX3-204ENST00000456948 ZCWPW2Q504Y3 356 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 TDRD10Q5VZ19 366 aaKnown RBP24.8■■□□□ 1.56
CBX3-204ENST00000456948 DNAJB7Q7Z6W7 309 aaPredicted RBP24.8■■□□□ 1.56
CBX3-204ENST00000456948 LRRTM3Q86VH5 581 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 ADSSL1Q8N142 457 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 OR6B3Q8NGW1 331 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 ERCC4Q92889 916 aaPredicted RBP24.8■■□□□ 1.56
CBX3-204ENST00000456948 PSMG2Q969U7 264 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 PBXIP1Q96AQ6 731 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 DNAI2Q9GZS0 605 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 GZF1Q9H116 711 aaPredicted RBP24.8■■□□□ 1.56
CBX3-204ENST00000456948 DOCK8Q8NF50 2099 aa24.8■■□□□ 1.56
CBX3-204ENST00000456948 TSC2P49815 1807 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 ANHXE9PGG2 379 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 VNN2O95498 520 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 HAPLN1P10915 354 aaPredicted RBP24.79■■□□□ 1.56
CBX3-204ENST00000456948 ACAT1P24752 427 aaKnown RBP24.79■■□□□ 1.56
CBX3-204ENST00000456948 GTF2H1P32780 548 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 EPHA5P54756 1037 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 DLG4P78352 724 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 ZACNQ401N2 412 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 SV2AQ7L0J3 742 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 LIMS2Q7Z4I7 341 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 BMP8AQ7Z5Y6 402 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 NPAS3Q8IXF0 933 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 PLEKHO2Q8TD55 490 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 ING5Q8WYH8 240 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 MCRS1Q96EZ8 462 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 FUBP3Q96I24 572 aaKnown RBP eCLIP24.79■■□□□ 1.56
CBX3-204ENST00000456948 GCNAQ96QF7 691 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 SYT15Q9BQS2 421 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 CRISPLD1Q9H336 500 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 MAN1B1Q9UKM7 699 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 GTF3C4Q9UKN8 822 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 FBXL21Q9UKT6 434 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 DUSP12Q9UNI6 340 aa24.79■■□□□ 1.56
CBX3-204ENST00000456948 BICDL2A1A5D9 508 aa24.78■■□□□ 1.56
CBX3-204ENST00000456948 PIK3CAP42336 1068 aa24.78■■□□□ 1.56
CBX3-204ENST00000456948 HTR4Q13639 388 aa24.78■■□□□ 1.56
CBX3-204ENST00000456948 PRSS36Q5K4E3 855 aa24.78■■□□□ 1.56
CBX3-204ENST00000456948 SCARA3Q6AZY7 606 aa24.78■■□□□ 1.56
CBX3-204ENST00000456948 SUGP1Q8IWZ8 645 aaKnown RBP24.78■■□□□ 1.56
CBX3-204ENST00000456948 SLC44A3Q8N4M1 653 aa24.78■■□□□ 1.56
CBX3-204ENST00000456948 MAGEC2Q9UBF1 373 aaPredicted RBP24.78■■□□□ 1.56
CBX3-204ENST00000456948 NUMBLQ9Y6R0 609 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms