RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 ATXN3LQ9H3M9 355 aa7.11□□□□□ -1.27
COMMD3-204ENST00000456711 NRDE2Q9H7Z3 1164 aa7.11□□□□□ -1.27
COMMD3-204ENST00000456711 BRD9Q9H8M2 597 aa7.11□□□□□ -1.27
COMMD3-204ENST00000456711 CARS2Q9HA77 564 aaKnown RBP7.11□□□□□ -1.27
COMMD3-204ENST00000456711 EPB41L4AQ9HCS5 686 aaPredicted RBP7.11□□□□□ -1.27
COMMD3-204ENST00000456711 TRPV5Q9NQA5 729 aa7.11□□□□□ -1.27
COMMD3-204ENST00000456711 RBM12Q9NTZ6 932 aaKnown RBP7.11□□□□□ -1.27
COMMD3-204ENST00000456711 PAG1Q9NWQ8 432 aa7.11□□□□□ -1.27
COMMD3-204ENST00000456711 NOB1Q9ULX3 412 aaKnown RBP7.11□□□□□ -1.27
COMMD3-204ENST00000456711 MRPL11Q9Y3B7 192 aaKnown RBP7.11□□□□□ -1.27
COMMD3-204ENST00000456711 PIAS3Q9Y6X2 628 aa7.11□□□□□ -1.27
COMMD3-204ENST00000456711 COL6A6A6NMZ7 2263 aa7.11□□□□□ -1.27
COMMD3-204ENST00000456711 CACNA1EQ15878 2313 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 PTPRBP23467 1997 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 MEFVO15553 781 aaPredicted RBP7.1□□□□□ -1.27
COMMD3-204ENST00000456711 FIBPO43427 364 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 TGM5O43548 720 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 SLC28A2O43868 658 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 B3GALT4O96024 378 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 SLC3A2P08195 630 aaKnown RBP7.1□□□□□ -1.27
COMMD3-204ENST00000456711 PCSK2P16519 638 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 ZSCAN20P17040 1043 aaPredicted RBP7.1□□□□□ -1.27
COMMD3-204ENST00000456711 CCNE1P24864 410 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 ITPKBP27987 946 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 SLC11A1P49279 550 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 GHRHRQ02643 423 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 CYP4F3Q08477 520 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 LMAN2Q12907 356 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 HNRNPDQ14103 355 aaKnown RBP7.1□□□□□ -1.27
COMMD3-204ENST00000456711 CDC37Q16543 378 aaPredicted RBP7.1□□□□□ -1.27
COMMD3-204ENST00000456711 PALB2Q86YC2 1186 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 TRAPPC12Q8WVT3 735 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 ELSPBP1Q96BH3 223 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 INPP4AQ96PE3 977 aaPredicted RBP7.1□□□□□ -1.27
COMMD3-204ENST00000456711 KCNC2Q96PR1 638 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 SENP7Q9BQF6 1050 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 SMARCAD1Q9H4L7 1026 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 PRKRIP1Q9H875 184 aaPredicted RBP7.1□□□□□ -1.27
COMMD3-204ENST00000456711 RXFP1Q9HBX9 757 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 MAP3K20Q9NYL2 800 aaKnown RBP7.1□□□□□ -1.27
COMMD3-204ENST00000456711 ANKMY1Q9P2S6 941 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 DNAJB4Q9UDY4 337 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 FBN2P35556 2912 aa7.1□□□□□ -1.27
COMMD3-204ENST00000456711 MYH6P13533 1939 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 ZMYM2Q9UBW7 1377 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 PDCD11Q14690 1871 aaKnown RBP7.09□□□□□ -1.27
COMMD3-204ENST00000456711 SALL3Q9BXA9 1300 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 A0A0U1RQF3 1178 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 EXTL3O43909 919 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 MAFO75444 373 aaPredicted RBP7.09□□□□□ -1.27
COMMD3-204ENST00000456711 BCAR3O75815 825 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 STAM2O75886 525 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 SOD2P04179 222 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 TOP1P11387 765 aaKnown RBP7.09□□□□□ -1.27
COMMD3-204ENST00000456711 GDNFP39905 211 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 CRYBB1P53674 252 aaPredicted RBP7.09□□□□□ -1.27
COMMD3-204ENST00000456711 ID3Q02535 119 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 PLCB4Q15147 1175 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 DGKKQ5KSL6 1271 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 TANGO2Q6ICL3 276 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 ZSCAN25Q6NSZ9 544 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 GPR155Q7Z3F1 870 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 SNX29Q8TEQ0 813 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 SEPT1Q8WYJ6 367 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 KCNN1Q92952 543 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 TNPO1Q92973 898 aaKnown RBP7.09□□□□□ -1.27
COMMD3-204ENST00000456711 TMEM47Q9BQJ4 181 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 ZNF334Q9HCZ1 680 aaPredicted RBP7.09□□□□□ -1.27
COMMD3-204ENST00000456711 TBC1D13Q9NVG8 400 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 IL17BQ9UHF5 180 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 NBPF19A0A087WUL8 3843 aa7.09□□□□□ -1.27
COMMD3-204ENST00000456711 DOPEY2Q9Y3R5 2298 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 MUC22E2RYF6 1773 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 ATMQ13315 3056 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 GSTTP1A0A1W2PQM5 241 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 ZNF862O60290 1169 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 HNRNPA1P09651 372 aaKnown RBP eCLIP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 SNHG28P0DPA3 235 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 MZF1P28698 734 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 MAPK8P45983 427 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 GLUD2P49448 558 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 MLLT6P55198 1093 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 MRPS9P82933 396 aaKnown RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 RNASELQ05823 741 aaKnown RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 GRM2Q14416 872 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 KARSQ15046 597 aaKnown RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 KIZQ2M2Z5 673 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 TAF1BQ53T94 588 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 GPATCH4Q5T3I0 446 aaKnown RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 C1orf228Q6PIY5 440 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 MTHFD1LQ6UB35 978 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 KIAA0319LQ8IZA0 1049 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 PNPLA1Q8N8W4 532 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 GIMAP8Q8ND71 665 aaPredicted RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 TTC16Q8NEE8 873 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 WBP1Q96G27 269 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 MSANTD3Q96H12 275 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 HERC2P3Q9BVR0 1158 aa7.08□□□□□ -1.28
COMMD3-204ENST00000456711 TRMT61BQ9BVS5 477 aaKnown RBP7.08□□□□□ -1.28
COMMD3-204ENST00000456711 UBA5Q9GZZ9 404 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms