RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 TFDP1Q14186 410 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 AOC3Q16853 763 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 LLGL2Q6P1M3 1020 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 MON1BQ7L1V2 547 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 NET1Q7Z628 596 aaPredicted RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 SDCCAG8Q86SQ7 713 aaPredicted RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 KBTBD2Q8IY47 623 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 FAM81AQ8TBF8 368 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 TMC2Q8TDI7 906 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 ITFG2Q969R8 447 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 TEKT1Q969V4 418 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 OXNAD1Q96HP4 312 aaPredicted RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 ST6GALNAC4Q9H4F1 302 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 ALG13Q9NP73 1137 aaKnown RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 C1orf112Q9NSG2 853 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 A0A1B0GVG6 124 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 B2RBV5 119 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 GOLGA8RI6L899 631 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 SGK1O00141 431 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 DDX39AO00148 427 aaKnown RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 FCHO1O14526 889 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 TLR3O15455 904 aaKnown RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 MT-ND3P03897 115 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 P4HBP07237 508 aaKnown RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 ANPEPP15144 967 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 ARL4CP56559 192 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 PLCB3Q01970 1234 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 CNPY1Q3B7I2 92 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 IZUMO2Q6UXV1 221 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 C3orf62Q6ZUJ4 267 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 OLFM3Q96PB7 478 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 DDX50Q9BQ39 737 aaKnown RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 C11orf70Q9BRQ4 267 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 SPATA16Q9BXB7 569 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 NDE1Q9NXR1 346 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 PI4KBQ9UBF8 816 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 DNAJB4Q9UDY4 337 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 PRR12Q9ULL5 1215 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 NFASCO94856 1347 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 PI4K2BG5E9Z4 385 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 GOLGA8SH3BPF8 625 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 GOLGA8MH3BSY2 632 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 RIMBP2O15034 1052 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 CREB3O43889 395 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 ZC3H11AO75152 810 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 IFNB1P01574 187 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 KRT1P04264 644 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 CYP1A1P04798 512 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 DLDP09622 509 aaKnown RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 MYL2P10916 166 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 AMPD1P23109 780 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 PEX3P56589 373 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 MAMLD1Q13495 774 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 PRKD1Q15139 912 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 TRMT5Q32P41 509 aaKnown RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 FAM91A1Q658Y4 838 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 HHIPL2Q6UWX4 724 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 RFX8Q6ZV50 586 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 NLRX1Q86UT6 975 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 CHSY1Q86X52 802 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 SCUBE1Q8IWY4 988 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 ZFPM1Q8IX07 1006 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 PALM2Q8IXS6 379 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 AZIN2Q96A70 460 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 PRR11Q96HE9 360 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 SLITRK1Q96PX8 696 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 FNBP1Q96RU3 617 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 RIT2Q99578 217 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 ECSITQ9BQ95 431 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 COA1Q9GZY4 146 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 ACSS3Q9H6R3 686 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 PCDH9Q9HC56 1237 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 KLHL11Q9NVR0 708 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 PDLIM1O00151 329 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 GLRA2P23416 452 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 SSTR1P30872 391 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 VCPP55072 806 aaKnown RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 MCL1Q07820 350 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 EFTUD2Q15029 972 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 DLGAP5Q15398 846 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 ABCB5Q2M3G0 1257 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 B3GNT9Q6UX72 402 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 TRIM72Q6ZMU5 477 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 SV2AQ7L0J3 742 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 ST13P4Q8IZP2 240 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 CERS5Q8N5B7 392 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 PPP2R3CQ969Q6 453 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 ELMO3Q96BJ8 720 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 OPTNQ96CV9 577 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 VCPIP1Q96JH7 1222 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 KLF6Q99612 283 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 DHRS4Q9BTZ2 278 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 PHACTR1Q9C0D0 580 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 C12orf65Q9H3J6 166 aaKnown RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 TOPORSQ9NS56 1045 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-204ENST00000455661 IP6K2Q9UHH9 426 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 IKBKGQ9Y6K9 419 aa14.41□□□□□ -0.1
PTPRE-204ENST00000455661 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms