RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TAF6P49848 677 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 ARHGAP8P85298 464 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 GTF2BQ00403 316 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 SIM2Q14190 667 aaPredicted RBP12.62□□□□□ -0.39
GARNL3-210ENST00000453030 SF3A1Q15459 793 aaKnown RBP12.62□□□□□ -0.39
GARNL3-210ENST00000453030 TAF12Q16514 161 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 WSCD1Q658N2 575 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 C1orf228Q6PIY5 440 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 RALGPS2Q86X27 583 aaPredicted RBP12.62□□□□□ -0.39
GARNL3-210ENST00000453030 METTL23Q86XA0 190 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 SFR1Q86XK3 245 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 EFCAB13Q8IY85 973 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 CELF5Q8N6W0 485 aaKnown RBP12.62□□□□□ -0.39
GARNL3-210ENST00000453030 STKLD1Q8NE28 680 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 BPIFB1Q8TDL5 484 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 ASB7Q9H672 318 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 TASP1Q9H6P5 420 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 IL21Q9HBE4 155 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 C2orf42Q9NWW7 574 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 DPP3Q9NY33 737 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 AGO2Q9UKV8 859 aaKnown RBP12.62□□□□□ -0.39
GARNL3-210ENST00000453030 DSEQ9UL01 958 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 DERAQ9Y315 318 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 C2CD2Q9Y426 696 aa12.62□□□□□ -0.39
GARNL3-210ENST00000453030 K7ESF4 209 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 BMP15O95972 392 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 ABCD1P33897 745 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 LONP1P36776 959 aaKnown RBP12.61□□□□□ -0.39
GARNL3-210ENST00000453030 TUFMP49411 452 aaKnown RBP12.61□□□□□ -0.39
GARNL3-210ENST00000453030 MCM2P49736 904 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 MLLT6P55198 1093 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-210ENST00000453030 LARP1BQ659C4 914 aaKnown RBP12.61□□□□□ -0.39
GARNL3-210ENST00000453030 DYMQ7RTS9 669 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 THEM5Q8N1Q8 247 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 KRI1Q8N9T8 703 aaKnown RBP12.61□□□□□ -0.39
GARNL3-210ENST00000453030 POMGNT1Q8WZA1 660 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 OBP2AQ9NY56 170 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 HSFX1Q9UBD0 423 aa12.61□□□□□ -0.39
GARNL3-210ENST00000453030 KMT2BQ9UMN6 2715 aaPredicted RBP12.6□□□□□ -0.39
GARNL3-210ENST00000453030 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
GARNL3-210ENST00000453030 HRO43593 1189 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 RETP07949 1114 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 PAX3P23760 479 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 GPR15P49685 360 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 CCINQ13939 588 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 SV2CQ496J9 727 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 DGKKQ5KSL6 1271 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 SLFN12LQ6IEE8 588 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 CEP68Q76N32 757 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 BRAPQ7Z569 592 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 LRRTM3Q86VH5 581 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 LONP2Q86WA8 852 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 SPPL2BQ8TCT7 592 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 FAM84AQ96KN4 292 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 ZNF560Q96MR9 790 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 RTKNQ9BST9 563 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 TBC1D7Q9P0N9 293 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 CCL26Q9Y258 94 aa12.6□□□□□ -0.39
GARNL3-210ENST00000453030 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.6□□□□□ -0.39
GARNL3-210ENST00000453030 NUP205Q92621 2012 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 KPNA7A9QM74 516 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 PAPSS2O95340 614 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 HAPLN1P10915 354 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 ADSSP30520 456 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 POLR2BP30876 1174 aaKnown RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 DDIT3P35638 169 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 AVPR1AP37288 418 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 WNT7BP56706 349 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 TFAMQ00059 246 aaKnown RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 TSPY1Q01534 308 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 KCNA1Q09470 495 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 BFSP1Q12934 665 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 ITPRIPL2Q3MIP1 535 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 SDHAF4Q5VUM1 108 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 TRIM68Q6AZZ1 485 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 PKN3Q6P5Z2 889 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 CRELD2Q6UXH1 353 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 PRR23CQ6ZRP0 262 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 CMTM8Q8IZV2 173 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 MAB21L3Q8N8X9 362 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 TTC16Q8NEE8 873 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 NOC3LQ8WTT2 800 aaKnown RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 C2orf15Q8WU43 125 aaKnown RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 SAAL1Q96ER3 474 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 CNTNAP3BQ96NU0 1288 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 FAM213AQ9BRX8 229 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 SLC46A2Q9BY10 475 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 CNTNAP3Q9BZ76 1288 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 CCSER1Q9C0I3 900 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 EBF3Q9H4W6 596 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 MRPL44Q9H9J2 332 aaKnown RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 SEMA4GQ9NTN9 838 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms