RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 TRPV4Q9HBA0 871 aa23.62■■□□□ 1.37
CPSF7-208ENST00000450000 DDX43Q9NXZ2 648 aaKnown RBP23.62■■□□□ 1.37
CPSF7-208ENST00000450000 SNX9Q9Y5X1 595 aa23.62■■□□□ 1.37
CPSF7-208ENST00000450000 PRR23AA6NEV1 266 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 DUOXA2Q1HG44 320 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 ASCL5Q7RTU5 278 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 BORCS6Q96GS4 357 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 FNBP1Q96RU3 617 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 C7orf25Q9BPX7 421 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 SEMA4AQ9H3S1 761 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 ZNF334Q9HCZ1 680 aaPredicted RBP23.61■■□□□ 1.37
CPSF7-208ENST00000450000 HSPBP1Q9NZL4 362 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 DLGAP2Q9P1A6 1054 aa23.61■■□□□ 1.37
CPSF7-208ENST00000450000 NDRG2Q9UN36 371 aaKnown RBP23.61■■□□□ 1.37
CPSF7-208ENST00000450000 PRPF40AO75400 957 aaKnown RBP23.6■■□□□ 1.37
CPSF7-208ENST00000450000 POTEHQ6S545 545 aa23.6■■□□□ 1.37
CPSF7-208ENST00000450000 UNC13DQ70J99 1090 aa23.6■■□□□ 1.37
CPSF7-208ENST00000450000 ARID3BQ8IVW6 561 aaPredicted RBP23.6■■□□□ 1.37
CPSF7-208ENST00000450000 PDCL2Q8N4E4 241 aa23.6■■□□□ 1.37
CPSF7-208ENST00000450000 LRRC3Q9BY71 257 aa23.6■■□□□ 1.37
CPSF7-208ENST00000450000 PCDHA7Q9UN72 937 aa23.6■■□□□ 1.37
CPSF7-208ENST00000450000 MTF2Q9Y483 593 aaPredicted RBP23.6■■□□□ 1.37
CPSF7-208ENST00000450000 HAPLN1P10915 354 aaPredicted RBP23.59■■□□□ 1.37
CPSF7-208ENST00000450000 AFMP43652 599 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 LHX1P48742 406 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 KPNA1P52294 538 aaPredicted RBP23.59■■□□□ 1.37
CPSF7-208ENST00000450000 WNT7BP56706 349 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 LMBRD2Q68DH5 695 aaPredicted RBP23.59■■□□□ 1.37
CPSF7-208ENST00000450000 LRRTM3Q86VH5 581 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 GPIHBP1Q8IV16 184 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 NELFCDQ8IXH7 590 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 RDH13Q8NBN7 331 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 GLIS3Q8NEA6 775 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 ZNF507Q8TCN5 953 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 ACBD6Q9BR61 282 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 PI4K2AQ9BTU6 479 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 BLZF1Q9H2G9 400 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 INTS13Q9NVM9 706 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 L1RE1Q9UN81 338 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 PIAS3Q9Y6X2 628 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 CACNA1HO95180 2353 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 MYH15Q9Y2K3 1946 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 UBE4BO95155 1302 aa23.59■■□□□ 1.37
CPSF7-208ENST00000450000 CLSTN1O94985 981 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 SP9P0CG40 484 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 GLULP15104 373 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 TNNI1P19237 187 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 TARSP26639 723 aaKnown RBP23.58■■□□□ 1.37
CPSF7-208ENST00000450000 PCSK1P29120 753 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 CYP2J2P51589 502 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 SNRPFP62306 86 aaKnown RBP23.58■■□□□ 1.37
CPSF7-208ENST00000450000 RPL10AP62906 217 aaKnown RBP23.58■■□□□ 1.37
CPSF7-208ENST00000450000 DNM1Q05193 864 aaKnown RBP23.58■■□□□ 1.37
CPSF7-208ENST00000450000 CNNM4Q6P4Q7 775 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 GAREM2Q75VX8 874 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 CBWD2Q8IUF1 395 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 ADGRF2Q8IZF7 708 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 TOP6BLQ8N6T0 577 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 FAM3CQ92520 227 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 HPDLQ96IR7 371 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 TASP1Q9H6P5 420 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 TRPV5Q9NQA5 729 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 THG1LQ9NWX6 298 aaKnown RBP23.58■■□□□ 1.37
CPSF7-208ENST00000450000 ZMYM5Q9UJ78 669 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 MAGED2Q9UNF1 606 aaPredicted RBP23.58■■□□□ 1.37
CPSF7-208ENST00000450000 R4GN57 208 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 NOTCH4Q99466 2003 aa23.58■■□□□ 1.37
CPSF7-208ENST00000450000 NRG2O14511 850 aaPredicted RBP23.57■■□□□ 1.36
CPSF7-208ENST00000450000 CHADO15335 359 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 LMNAP02545 664 aaKnown RBP23.57■■□□□ 1.36
CPSF7-208ENST00000450000 DLATP10515 647 aaKnown RBP23.57■■□□□ 1.36
CPSF7-208ENST00000450000 ATF6P18850 670 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 CYP4F8P98187 520 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 STXBP5Q5T5C0 1151 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 RESP18Q5W5W9 173 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 SPATA2LQ8IUW3 424 aaPredicted RBP23.57■■□□□ 1.36
CPSF7-208ENST00000450000 WDR49Q8IV35 697 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 SPATA18Q8TC71 538 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 HINFPQ9BQA5 517 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 GDAP2Q9NXN4 497 aa23.57■■□□□ 1.36
CPSF7-208ENST00000450000 PVALEFA0A1B0GWK0 134 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 CLIC2O15247 247 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 CSH1P0DML2 217 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 CSH2P0DML3 217 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 ACAT1P24752 427 aaKnown RBP23.56■■□□□ 1.36
CPSF7-208ENST00000450000 CSTF1Q05048 431 aaKnown RBP23.56■■□□□ 1.36
CPSF7-208ENST00000450000 PPP2R5DQ14738 602 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 SNRNP35Q16560 246 aaKnown RBP23.56■■□□□ 1.36
CPSF7-208ENST00000450000 ARHGAP29Q52LW3 1261 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 INTS6LQ5JSJ4 861 aaKnown RBP23.56■■□□□ 1.36
CPSF7-208ENST00000450000 C1orf228Q6PIY5 440 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 DPH6Q7L8W6 267 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 ADSSL1Q8N142 457 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 XXYLT1Q8NBI6 393 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 MSANTD3Q96H12 275 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 MMS19Q96T76 1030 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 SLC39A2Q9NP94 309 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 AGPAT3Q9NRZ7 376 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 FBXO4Q9UKT5 387 aa23.56■■□□□ 1.36
CPSF7-208ENST00000450000 AVPR1AP37288 418 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms