RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ZNF662Q6ZS27 426 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 OSTM1Q86WC4 334 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 HERC6Q8IVU3 1022 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 HASPINQ8TF76 798 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 TFAP2BQ92481 460 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 TNIP3Q96KP6 325 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 YME1L1Q96TA2 773 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 PPP2R2CQ9Y2T4 447 aa20.51■□□□□ 0.87
RPS28-202ENST00000449223 SF3B1O75533 1304 aaKnown RBP eCLIP20.51■□□□□ 0.87
RPS28-202ENST00000449223 THAP12O43422 761 aa20.5■□□□□ 0.87
RPS28-202ENST00000449223 MED7O43513 233 aa20.5■□□□□ 0.87
RPS28-202ENST00000449223 CYP1A1P04798 512 aaPredicted RBP20.5■□□□□ 0.87
RPS28-202ENST00000449223 LAG3P18627 525 aa20.5■□□□□ 0.87
RPS28-202ENST00000449223 LMO2P25791 158 aa20.5■□□□□ 0.87
RPS28-202ENST00000449223 CDH5P33151 784 aaPredicted RBP20.5■□□□□ 0.87
RPS28-202ENST00000449223 SPA17Q15506 151 aa20.5■□□□□ 0.87
RPS28-202ENST00000449223 ALKBH5Q6P6C2 394 aaKnown RBP20.5■□□□□ 0.87
RPS28-202ENST00000449223 RNF168Q8IYW5 571 aaPredicted RBP20.5■□□□□ 0.87
RPS28-202ENST00000449223 ACRBPQ8NEB7 543 aa20.5■□□□□ 0.87
RPS28-202ENST00000449223 DESI2Q9BSY9 194 aa20.5■□□□□ 0.87
RPS28-202ENST00000449223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.5■□□□□ 0.87
RPS28-202ENST00000449223 MRPL42Q9Y6G3 142 aaKnown RBP20.5■□□□□ 0.87
RPS28-202ENST00000449223 CEP290O15078 2479 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 O00370 1275 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 CCP110O43303 1012 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 OAZ2O95190 189 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 LSM8O95777 96 aaKnown RBP20.49■□□□□ 0.87
RPS28-202ENST00000449223 LINC00271P0C7V0 271 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 UNGP13051 313 aaPredicted RBP20.49■□□□□ 0.87
RPS28-202ENST00000449223 FGFR3P22607 806 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 PCSK1P29120 753 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 CNGA2Q16280 664 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 SGO2Q562F6 1265 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 ARHGAP17Q68EM7 881 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 FAM117BQ6P1L5 589 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 FUT10Q6P4F1 479 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 KCNT2Q6UVM3 1135 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 METTL23Q86XA0 190 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 PALB2Q86YC2 1186 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 CLP1Q92989 425 aaKnown RBP20.49■□□□□ 0.87
RPS28-202ENST00000449223 PCDHB18PQ96TA0 734 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 RAD9AQ99638 391 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 ACBD6Q9BR61 282 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 ZNF518BQ9C0D4 1074 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 ISCUQ9H1K1 167 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 LHX5Q9H2C1 402 aa20.49■□□□□ 0.87
RPS28-202ENST00000449223 LUC7LQ9NQ29 371 aaKnown RBP20.49■□□□□ 0.87
RPS28-202ENST00000449223 DDX43Q9NXZ2 648 aaKnown RBP20.49■□□□□ 0.87
RPS28-202ENST00000449223 I3L4J1 428 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 ZSCAN12O43309 604 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 CAPN15O75808 1086 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 CALCAP01258 141 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 ATP2A2P16615 1042 aaKnown RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 BRD2P25440 801 aaKnown RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 MAGEA10P43363 369 aaPredicted RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 CYP27A1Q02318 531 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 TAF3Q5VWG9 929 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 PPP1R2P3Q6NXS1 205 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 ACOT1Q86TX2 421 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 TMEM173Q86WV6 379 aaPredicted RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 CCAR2Q8N163 923 aaKnown RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 B3GALNT2Q8NCR0 500 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 IGSF21Q96ID5 467 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 ZNF558Q96NG5 402 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 RTP3Q9BQQ7 232 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 DPEP3Q9H4B8 488 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 CDH9Q9ULB4 789 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 INTUQ9ULD6 942 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.48■□□□□ 0.87
RPS28-202ENST00000449223 VAV2P52735 878 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 CENPCQ03188 943 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 ORC1Q13415 861 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 MRPL58Q14197 206 aaKnown RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 CLEC16AQ2KHT3 1053 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 OVOS1Q6IE37 1185 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 LCLAT1Q6UWP7 414 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 SLC39A11Q8N1S5 342 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 TXLNBQ8N3L3 684 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 BCL7CQ8WUZ0 217 aaPredicted RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 HEXIM2Q96MH2 286 aaKnown RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 GPR62Q9BZJ7 368 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 PCDHA13Q9Y5I0 950 aa20.48■□□□□ 0.87
RPS28-202ENST00000449223 TIMM13Q9Y5L4 95 aaPredicted RBP20.48■□□□□ 0.87
RPS28-202ENST00000449223 CD19P15391 556 aa20.47■□□□□ 0.87
RPS28-202ENST00000449223 NOMO3P69849 1222 aa20.47■□□□□ 0.87
RPS28-202ENST00000449223 YWHAHQ04917 246 aaPredicted RBP20.47■□□□□ 0.87
RPS28-202ENST00000449223 CCDC122Q5T0U0 273 aa20.47■□□□□ 0.87
RPS28-202ENST00000449223 C12orf29Q8N999 325 aa20.47■□□□□ 0.87
RPS28-202ENST00000449223 COLGALT1Q8NBJ5 622 aa20.47■□□□□ 0.87
RPS28-202ENST00000449223 STK39Q9UEW8 545 aa20.47■□□□□ 0.87
RPS28-202ENST00000449223 PUF60Q9UHX1 559 aaKnown RBP20.47■□□□□ 0.87
RPS28-202ENST00000449223 GOLGA6L9A6NEM1 432 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 NT5C1B-RDH14C9J2C7 533 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 PJA2O43164 708 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 HCRTO43612 131 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 RTN2O75298 545 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 CFHP08603 1231 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 PDGFRBP09619 1106 aa20.46■□□□□ 0.87
RPS28-202ENST00000449223 PTPN1P18031 435 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms