RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 CDC26Q8NHZ8 85 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 SKA2Q8WVK7 121 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 APOL4Q9BPW4 351 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 ADAM33Q9BZ11 813 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 CCSER1Q9C0I3 900 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 NACA2Q9H009 215 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 SPRTNQ9H040 489 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 GCNT4Q9P109 453 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 DDX20Q9UHI6 824 aaKnown RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 PIK3R2O00459 728 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 ELF3P78545 371 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 IFRD2Q12894 506 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 GET4Q7L5D6 327 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 ZNF184Q99676 751 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 MARCOQ9UEW3 520 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 PNMA8CA0A1B0GUJ8 204 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 GOLGA8SH3BPF8 625 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 TRIM13O60858 407 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 ZBED1O96006 694 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 RALGDSQ12967 914 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 USP4Q13107 963 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 LAMC2Q13753 1193 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 NR1D2Q14995 579 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 TRMT5Q32P41 509 aaKnown RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 RUNDC3AQ59EK9 446 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 KIAA1755Q5JYT7 1200 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 LRRC74BQ6ZQY2 392 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 PASD1Q8IV76 773 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 LINC00116Q8NCU8 138 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 CCNYQ8ND76 341 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 RMND5BQ96G75 393 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 CACNA2D2Q9NY47 1150 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 USE1Q9NZ43 259 aa9.62□□□□□ -0.87
SMC6-207ENST00000448223 CCDC59Q9P031 241 aaKnown RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 RABL2AQ9UBK7 228 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 PRG3Q9Y2Y8 225 aaPredicted RBP9.62□□□□□ -0.87
SMC6-207ENST00000448223 LOC100653049A0A140TA62 436 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 TMEM247A6NEH6 219 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 RNF103O00237 685 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 MATN2O00339 956 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 KRT34O76011 436 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 PCP11498 1178 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 ALOX12P18054 663 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 NLRP11P59045 1033 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 COG2Q14746 738 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 TSC22D1Q15714 1073 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ATG14Q6ZNE5 492 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 DHX38Q92620 1227 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 RAD54LQ92698 747 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ELMO3Q96BJ8 720 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ANKRD36BP1Q96IX9 119 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 LZTS2Q9BRK4 669 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 MOSPD1Q9UJG1 213 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 TTC7AQ9ULT0 858 aaPredicted RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 SCAF8Q9UPN6 1271 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 RBMX2Q9Y388 322 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 TRIM43BA6NCK2 446 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 BTN3A3O00478 584 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 RAD51CO43502 376 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ZNF862O60290 1169 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 LGALS3BPQ08380 585 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 TRAF2Q12933 501 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 PAPD7Q5XG87 772 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 MARK2Q7KZI7 788 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 SETD3Q86TU7 594 aaPredicted RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 GLYCTKQ8IVS8 523 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 KBTBD2Q8IY47 623 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 KCTD6Q8NC69 237 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 JADE3Q92613 823 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ZCWPW1Q9H0M4 648 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 PARVAQ9NVD7 372 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 KBTBD4Q9NVX7 518 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 MAGED2Q9UNF1 606 aaPredicted RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 BTBD3Q9Y2F9 522 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 PHGDHO43175 533 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 SRGAP2CP0DJJ0 459 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 PSMC2P35998 433 aaKnown RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 NSMFQ6X4W1 530 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 CDAN1Q8IWY9 1227 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ENKURQ8TC29 256 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 AGR3Q8TD06 166 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 RSPH1Q8WYR4 309 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 TRIM51Q9BSJ1 452 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 RXFP1Q9HBX9 757 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ABCF3Q9NUQ8 709 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 CLIC5Q9NZA1 410 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 SERPINB13Q9UIV8 391 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 SPEF2Q9C093 1822 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 CCDC162PA2VCL2 907 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 LRRC10BA6NIK2 292 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ZNF263O14978 683 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 HOXA7P31268 230 aaPredicted RBP9.61□□□□□ -0.87
SMC6-207ENST00000448223 GRB10Q13322 594 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 SLFN13Q68D06 897 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 C16orf62Q7Z3J2 963 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 ADGRF4Q8IZF3 695 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 C4orf33Q8N1A6 199 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 MMGT1Q8N4V1 131 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 EXT2Q93063 718 aa9.61□□□□□ -0.87
SMC6-207ENST00000448223 JMJD4Q9H9V9 463 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms