RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 ZBED2Q9BTP6 218 aa12.69□□□□□ -0.38
SCAP-208ENST00000448217 GPR62Q9BZJ7 368 aa12.69□□□□□ -0.38
SCAP-208ENST00000448217 KCND1Q9NSA2 647 aa12.69□□□□□ -0.38
SCAP-208ENST00000448217 SPG21Q9NZD8 308 aa12.69□□□□□ -0.38
SCAP-208ENST00000448217 HMGXB4Q9UGU5 601 aa12.69□□□□□ -0.38
SCAP-208ENST00000448217 CDH9Q9ULB4 789 aa12.69□□□□□ -0.38
SCAP-208ENST00000448217 RWDD3Q9Y3V2 267 aa12.69□□□□□ -0.38
SCAP-208ENST00000448217 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCAP-208ENST00000448217 NLRC5Q86WI3 1866 aa12.69□□□□□ -0.38
SCAP-208ENST00000448217 PDE4DIPQ5VU43 2346 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 SOWAHDA6NJG2 315 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 A8MXQ7 604 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 DDX3XO00571 662 aaKnown RBP eCLIP12.68□□□□□ -0.382e-9■■■■■ 32
SCAP-208ENST00000448217 MED7O43513 233 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 TLL1O43897 1013 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 TBC1D4O60343 1298 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 NDUFA10O95299 355 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 GZMAP12544 262 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 LMO2P25791 158 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 CDH5P33151 784 aaPredicted RBP12.68□□□□□ -0.38
SCAP-208ENST00000448217 KIF11P52732 1056 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 FMO1Q01740 532 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 PLCB3Q01970 1234 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 CNGA2Q16280 664 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 C10orf76Q5T2E6 689 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 PPP1R2P3Q6NXS1 205 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 TRIM72Q6ZMU5 477 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 TMEM173Q86WV6 379 aaPredicted RBP12.68□□□□□ -0.38
SCAP-208ENST00000448217 SLC20A1Q8WUM9 679 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 TFAP2BQ92481 460 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 RNPC3Q96LT9 517 aaKnown RBP12.68□□□□□ -0.38
SCAP-208ENST00000448217 ZNF830Q96NB3 372 aaPredicted RBP12.68□□□□□ -0.38
SCAP-208ENST00000448217 ZSWIM1Q9BR11 485 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 LHX5Q9H2C1 402 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 CHST7Q9NS84 486 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 GBF1Q92538 1859 aa12.68□□□□□ -0.38
SCAP-208ENST00000448217 PTPRDP23468 1912 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 A0A087X0T9 212 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 C5orf67F2Z3F1 127 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 H0YGN5 161 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 I3L4J1 428 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 O00370 1275 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 AKR1B10O60218 316 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 LSM8O95777 96 aaKnown RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 SOD2P04179 222 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 CYP1A1P04798 512 aaPredicted RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 FAM228BP0C875 321 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 TNFAIP3P21580 790 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 TKTP29401 623 aaKnown RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 YWHAHQ04917 246 aaPredicted RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 USP41Q3LFD5 358 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 ZNF394Q53GI3 561 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 SGO2Q562F6 1265 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 FAM171A1Q5VUB5 890 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 OVOS1Q6IE37 1185 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 FAM171BQ6P995 826 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 LCLAT1Q6UWP7 414 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 DDX53Q86TM3 631 aaKnown RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 THEM5Q8N1Q8 247 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 LNX1Q8TBB1 728 aaPredicted RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 HASPINQ8TF76 798 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 TMEM169Q96HH4 297 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 PKMYT1Q99640 499 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 HNRNPABQ99729 332 aaKnown RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 HERC2P3Q9BVR0 1158 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 VN1R3Q9BXE9 311 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 UBE2OQ9C0C9 1292 aaKnown RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 ZNF518BQ9C0D4 1074 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 ACP6Q9NPH0 428 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
SCAP-208ENST00000448217 ADAMTS1Q9UHI8 967 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 NAGPAQ9UK23 515 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.67□□□□□ -0.38
SCAP-208ENST00000448217 ZKSCAN5Q9Y2L8 839 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 PCDHB12Q9Y5F1 795 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 PCDHA11Q9Y5I1 949 aa12.67□□□□□ -0.38
SCAP-208ENST00000448217 LINC01553A4QN01 128 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 OR6C75A6NL08 312 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 NT5C1B-RDH14C9J2C7 533 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 H7C4K7 107 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 ZNF263O14978 683 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 THAP12O43422 761 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 RB1P06400 928 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 MMEP08473 750 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 UNGP13051 313 aaPredicted RBP12.66□□□□□ -0.38
SCAP-208ENST00000448217 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
SCAP-208ENST00000448217 BMPR1AP36894 532 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 PBX3P40426 434 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 KRT83P78385 493 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 MTF1Q14872 753 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
SCAP-208ENST00000448217 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 INTS6LQ5JSJ4 861 aaKnown RBP12.66□□□□□ -0.38
SCAP-208ENST00000448217 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
SCAP-208ENST00000448217 SPOUT1Q5T280 376 aaKnown RBP12.66□□□□□ -0.38
SCAP-208ENST00000448217 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 ANKS3Q6ZW76 656 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
SCAP-208ENST00000448217 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms