RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SCAPQ12770 1279 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 TUBA3CQ13748 450 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 WDR78Q5VTH9 848 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 TUBA3EQ6PEY2 450 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 USP37Q86T82 979 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 MAML1Q92585 1016 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 MYD88Q99836 296 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 CNPPD1Q9BV87 410 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 NAA15Q9BXJ9 866 aaKnown RBP5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 SMURF2Q9HAU4 748 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 CNNM1Q9NRU3 951 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 ABHD14A-ACY1A0A1B0GW23 586 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 ISM1B1AKI9 464 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 PIP5K1CO60331 668 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 NBNO60934 754 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 UNC5CO95185 931 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 KIF20AO95235 890 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 GPANK1O95872 356 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 SETSIPP0DME0 302 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 KCNA2P16389 499 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 ALDH5A1P51649 535 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 PIGFQ07326 219 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 CYP2A13Q16696 494 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 LONRF1Q17RB8 773 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 ARMC6Q6NXE6 501 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 MRGPREQ86SM8 312 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 POC1BQ8TC44 478 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 BTBD1Q9H0C5 482 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 STK32BQ9NY57 414 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 FBXO9Q9UK97 447 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 MAP3K2Q9Y2U5 619 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 PCDHGB6Q9Y5F9 930 aa5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P48-201ENST00000446155 A0A087WWL8 130 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 CENPVL1A0A0U1RR11 272 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 CCDC195A0A1B0GUA6 201 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 MYADML2A6NDP7 307 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 E7ENX8 843 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 M0QYG6 137 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 LPXNO60711 386 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 NDUFA10O95299 355 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 GNAI2P04899 355 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 THP07101 528 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZKSCAN1P17029 563 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 TYRP1P17643 537 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 LAG3P18627 525 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 BDNFP23560 247 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 DDX6P26196 483 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 SLC7A1P30825 629 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 TAP2Q03519 686 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZNF844Q08AG5 666 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 RESTQ13127 1097 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 BOP1Q14137 746 aaKnown RBP5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 ALFQ53S48 1182 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 FAM160B1Q5W0V3 765 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 IGFL4Q6B9Z1 124 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 TAPT1Q6NXT6 567 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 CRIP3Q6Q6R5 217 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 PCGF5Q86SE9 256 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 ARHGEF19Q8IW93 802 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 CPEB3Q8NE35 698 aaKnown RBP5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 ACRBPQ8NEB7 543 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 SCLT1Q96NL6 688 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 SPATA5L1Q9BVQ7 753 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 SIK2Q9H0K1 926 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 RNF181Q9P0P0 153 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 HESX1Q9UBX0 185 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 SWAP70Q9UH65 585 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 TPCN1Q9ULQ1 816 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 GTF2A1LQ9UNN4 478 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 NEU2Q9Y3R4 380 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 PLEKHM1Q9Y4G2 1056 aa5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 LAS1LQ9Y4W2 734 aaKnown RBP5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 MORC2Q9Y6X9 1032 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P48-201ENST00000446155 PRAMEF33A0A0G2JMD5 474 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 F5H423 210 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 POLRMTO00411 1230 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 NARSO43776 548 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 PRAMEF10O60809 474 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 CDKL5O76039 1030 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 SPDEFO95238 335 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 HLA-DOAP06340 250 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 INSRRP14616 1297 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 PTGS2P35354 604 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 KCNJ5P48544 419 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 ANXA11P50995 505 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 VAV2P52735 878 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 MC2RQ01718 297 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 MAPRE1Q15691 268 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 GEN1Q17RS7 908 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 LSM12Q3MHD2 195 aaKnown RBP5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 CCDC70Q6NSX1 233 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 FOXR2Q6PJQ5 311 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 SKAP1Q86WV1 359 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 MICU3Q86XE3 530 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 ZNF354CQ86Y25 554 aa5.37□□□□□ -1.55
HMGB1P48-201ENST00000446155 Q8N1X5 172 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms