RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 R3HCC1LQ7Z5L2 792 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 DDX53Q86TM3 631 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 P3H2Q8IVL5 708 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SCN4BQ8IWT1 228 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 TMEM145Q8NBT3 493 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 LRRN4CLQ8ND94 238 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 WASF1Q92558 559 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ATP6V0A1Q93050 837 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 TUBA1CQ9BQE3 449 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 AP5M1Q9H0R1 490 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 MUC13Q9H3R2 512 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 FANCEQ9HB96 536 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 IARS2Q9NSE4 1012 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 ATAD3AQ9NVI7 634 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 UBAP1Q9NZ09 502 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 HMG20BQ9P0W2 317 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SMG5Q9UPR3 1016 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 EMC9Q9Y3B6 208 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SNAPC4Q5SXM2 1469 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 IRS2Q9Y4H2 1338 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 LRRIQ4A6NIV6 560 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 TULP2O00295 520 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 B4GALT4O60513 344 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SCG5P05408 212 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 NUDT7P0C024 238 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 BCRP11274 1271 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CCR1P32246 355 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CASP3P42574 277 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CTSOP43234 321 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 PSEN2P49810 448 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ATN1P54259 1190 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 PTPN5P54829 565 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 HUNKP57058 714 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 RAB1AP62820 205 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CCDC173Q0VFZ6 552 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 BTG3Q14201 252 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 TRIM25Q14258 630 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 TMEM177Q53S58 311 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ZRANB3Q5FWF4 1079 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 FBXO48Q5FWF7 155 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 TOR1AIP1Q5JTV8 583 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 IFFO2Q5TF58 517 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SULT6B1Q6IMI4 303 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 C6orf89Q6UWU4 347 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 GPR149Q86SP6 731 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 TXNRD3Q86VQ6 643 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ZNF687Q8N1G0 1237 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 GALNT4Q8N4A0 578 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 RFWD2Q8NHY2 731 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CASP10Q92851 521 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 MR1Q95460 341 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 TMIGD2Q96BF3 282 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 C8orf33Q9H7E9 229 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 GORASP2Q9H8Y8 452 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 TMEM184CQ9NVA4 438 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 UCKL1Q9NWZ5 548 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SELENONQ9NZV5 590 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 PLAGL2Q9UPG8 496 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ATP8B3O60423 1300 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 MYO3BQ8WXR4 1341 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 PCF11O94913 1555 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 GNAT3A8MTJ3 354 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SMAD6O43541 496 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 CACNG3O60359 315 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CYP3A4P08684 503 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 AOAHP28039 575 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 AKT1P31749 480 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 RFC2P35250 354 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 TAGLN2P37802 199 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 PSMB10P40306 273 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 HAAOP46952 286 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CYP4F8P98187 520 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 BNIP1Q12981 228 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CNGA2Q16280 664 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CCDC40Q4G0X9 1142 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SH2D4BQ5SQS7 431 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 FYB2Q5VWT5 728 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 MFSD5Q6N075 450 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 DRICH1Q6PGQ1 229 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 TRIM72Q6ZMU5 477 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SRBD1Q8N5C6 995 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 CHST14Q8NCH0 376 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 RASSF8Q8NHQ8 419 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ZNF671Q8TAW3 534 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SLC22A17Q8WUG5 538 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 DDX17Q92841 729 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 SPACA9Q96E40 222 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 KTI12Q96EK9 354 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 DTNBP1Q96EV8 351 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 HHIPQ96QV1 700 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ZKSCAN3Q9BRR0 538 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CELF4Q9BZC1 486 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 GPR63Q9BZJ6 419 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 NYXQ9GZU5 481 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SYNCQ9H7C4 482 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 WBP1LQ9NX94 342 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ETAA1Q9NY74 926 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CARD8Q9Y2G2 431 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 GPR45Q9Y5Y3 372 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 PMS2P1A4D2B8 440 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms