RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ASAH2Q9NR71 780 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 GDE1Q9NZC3 331 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 ITGA11Q9UKX5 1188 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 NME7Q9Y5B8 376 aa11.71□□□□□ -0.53
SF3A1-203ENST00000444440 F5P12259 2224 aa11.71□□□□□ -0.54
SF3A1-203ENST00000444440 UBE4BO95155 1302 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 PVALEFA0A1B0GWK0 134 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 ZNF233A6NK53 670 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 MICAL2O94851 1124 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 TMEM191BP0C7N4 346 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 HAPLN1P10915 354 aaPredicted RBP11.7□□□□□ -0.54
SF3A1-203ENST00000444440 PAX3P23760 479 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 CMA1P23946 247 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 CASP4P49662 377 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 NDUFA8P51970 172 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 STARD6P59095 220 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 CYP24A1Q07973 514 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 MLF2Q15773 248 aaPredicted RBP11.7□□□□□ -0.54
SF3A1-203ENST00000444440 SNRNP35Q16560 246 aaKnown RBP11.7□□□□□ -0.54
SF3A1-203ENST00000444440 SOWAHAQ2M3V2 549 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 KMT5BQ4FZB7 885 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 CYP4A22Q5TCH4 519 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 SDHAF4Q5VUM1 108 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 LIMS2Q7Z4I7 341 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 DNAJB7Q7Z6W7 309 aaPredicted RBP11.7□□□□□ -0.54
SF3A1-203ENST00000444440 ELMOD1Q8N336 334 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 LRRC52Q8N7C0 313 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 DTWD2Q8NBA8 298 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 ZSCAN18Q8TBC5 510 aaPredicted RBP11.7□□□□□ -0.54
SF3A1-203ENST00000444440 GIPC2Q8TF65 315 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 KBTBD7Q8WVZ9 684 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 ZNF516Q92618 1163 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 PSMG2Q969U7 264 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 ELMO3Q96BJ8 720 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 LRRC3BQ96PB8 259 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 PRRX2Q99811 253 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
SF3A1-203ENST00000444440 GDAP2Q9NXN4 497 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 DDX43Q9NXZ2 648 aaKnown RBP11.7□□□□□ -0.54
SF3A1-203ENST00000444440 DSEQ9UL01 958 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 ATP6V1DQ9Y5K8 247 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 SNX9Q9Y5X1 595 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 PIEZO1Q92508 2521 aa11.7□□□□□ -0.54
SF3A1-203ENST00000444440 FAM237AA0A1B0GTK4 181 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 STK25O00506 426 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 ZNF197O14709 1029 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 GABRDO14764 452 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 KIAA0391O15091 583 aaKnown RBP11.69□□□□□ -0.54
SF3A1-203ENST00000444440 ATP2C2O75185 946 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 CST3P01034 146 aaPredicted RBP11.69□□□□□ -0.54
SF3A1-203ENST00000444440 GABRR2P28476 465 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 PNPLA4P41247 253 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 ALDH1A3P47895 512 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 NUBP1P53384 320 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 EPHB3P54753 998 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 KRT85P78386 507 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 CYP4F8P98187 520 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 MGAT5BQ3V5L5 792 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 SLC44A4Q53GD3 710 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 PHLDB3Q6NSJ2 640 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 STXBP4Q6ZWJ1 553 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 TMEM150AQ86TG1 271 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 METTL23Q86XA0 190 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 CEP57L1Q8IYX8 460 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 PJA1Q8NG27 643 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 CACTINQ8WUQ7 758 aaKnown RBP11.69□□□□□ -0.54
SF3A1-203ENST00000444440 ATOH1Q92858 354 aaPredicted RBP11.69□□□□□ -0.54
SF3A1-203ENST00000444440 SMARCD2Q92925 531 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 PI4K2AQ9BTU6 479 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 HEBP1Q9NRV9 189 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 ABI2Q9NYB9 513 aaPredicted RBP11.69□□□□□ -0.54
SF3A1-203ENST00000444440 HSFX1Q9UBD0 423 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 DMXL1Q9Y485 3027 aa11.69□□□□□ -0.54
SF3A1-203ENST00000444440 ARNTLO00327 626 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 TADA3O75528 432 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 PRAMEF12O95522 483 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 DLATP10515 647 aaKnown RBP11.68□□□□□ -0.54
SF3A1-203ENST00000444440 HMGA1P17096 107 aaKnown RBP11.68□□□□□ -0.54
SF3A1-203ENST00000444440 CYP2F1P24903 491 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 LMO2P25791 158 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 TARSP26639 723 aaKnown RBP11.68□□□□□ -0.54
SF3A1-203ENST00000444440 RBP5P82980 135 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 PLD1Q13393 1074 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 PSMD6Q15008 389 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 ANGPT1Q15389 498 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 KNOP1Q1ED39 458 aaKnown RBP11.68□□□□□ -0.54
SF3A1-203ENST00000444440 INTS6LQ5JSJ4 861 aaKnown RBP11.68□□□□□ -0.54
SF3A1-203ENST00000444440 TRAPPC11Q7Z392 1133 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 WDR49Q8IV35 697 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 C12orf56Q8IXR9 622 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 ADGRF2Q8IZF7 708 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 THEM5Q8N1Q8 247 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 XXYLT1Q8NBI6 393 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 LEMD2Q8NC56 503 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 SPPL2BQ8TCT7 592 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 CCDC127Q96BQ5 260 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 HPDLQ96IR7 371 aa11.68□□□□□ -0.54
SF3A1-203ENST00000444440 ANKRD36BP1Q96IX9 119 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms