RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 SV2CQ496J9 727 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 EMC1Q8N766 993 aa23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 CCDC124Q96CT7 223 aaKnown RBP23.47■■□□□ 1.35
CTDSPL-206ENST00000443503 LMNAP02545 664 aaKnown RBP23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 MAPTP10636 758 aaKnown RBP23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 CTCFP49711 727 aaPredicted RBP23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 ZNF235Q14590 738 aa23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 C1orf186Q6ZWK4 172 aa23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 ERP27Q96DN0 273 aa23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 UBA6A0AVT1 1052 aaPredicted RBP23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 CCDC22O60826 627 aa23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 RARGP13631 454 aa23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 KRT80Q6KB66 452 aa23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 MMTAG2Q9BU76 263 aaKnown RBP23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 TAF6P49848 677 aa23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 CNTN2Q02246 1040 aa23.46■■□□□ 1.35
CTDSPL-206ENST00000443503 NVLO15381 856 aaKnown RBP23.45■■□□□ 1.35
CTDSPL-206ENST00000443503 STAG3L1P0CL83 205 aa23.45■■□□□ 1.35
CTDSPL-206ENST00000443503 KDM7AQ6ZMT4 941 aa23.45■■□□□ 1.35
CTDSPL-206ENST00000443503 TRPM8Q7Z2W7 1104 aa23.45■■□□□ 1.35
CTDSPL-206ENST00000443503 PIP4K2CQ8TBX8 421 aa23.45■■□□□ 1.35
CTDSPL-206ENST00000443503 UBQLN1Q9UMX0 589 aaKnown RBP23.45■■□□□ 1.35
CTDSPL-206ENST00000443503 C3P01024 1663 aa23.45■■□□□ 1.35
CTDSPL-206ENST00000443503 PCSK1P29120 753 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 KDSRQ06136 332 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 MORF4L2Q15014 288 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 EFHC1Q5JVL4 640 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 MIIPQ5JXC2 388 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 WDR59Q6PJI9 974 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 CREG2Q8IUH2 290 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 FZD1Q9UP38 647 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 TRIM33Q9UPN9 1127 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 A0A087WZ62 844 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 TRAPPC3O43617 180 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 NIPA1Q7RTP0 329 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 TNFRSF25Q93038 417 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 FDXACB1Q9BRP7 624 aaPredicted RBP23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 GLIS2Q9BZE0 524 aaPredicted RBP23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 MRC1P22897 1456 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 DNAJC3Q13217 504 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 FKBP1CQ5VVH2 108 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 LVRNQ6Q4G3 990 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 PPCSQ9HAB8 311 aa23.45■■□□□ 1.34
CTDSPL-206ENST00000443503 KIF1AQ12756 1690 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 PJA2O43164 708 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 CAND2O75155 1236 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SNRPAP09012 282 aaKnown RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 TM4SF1P30408 202 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 FKBP1AP62942 108 aaKnown RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SATB1Q01826 763 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 CLEC16AQ2KHT3 1053 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 ZNF484Q5JVG2 852 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SPIRE2Q8WWL2 714 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 RMDN1Q96DB5 314 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SERPINB12Q96P63 405 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 MTFR1LQ9H019 292 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 CXCL8P10145 99 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 PDK1Q15118 436 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 LY6KQ17RY6 165 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 PABPC5Q96DU9 382 aaKnown RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 ZBED2Q9BTP6 218 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 MROH8Q9H579 483 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 WDR70Q9NW82 654 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 TJP2Q9UDY2 1190 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SNX2O60749 519 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 STIP1P31948 543 aaKnown RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 LAMTOR4Q0VGL1 99 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 TFDP3Q5H9I0 405 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SPATA20Q8TB22 786 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 KAT5Q92993 513 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 LBHD1Q9BQE6 289 aaPredicted RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 MRIQ9BWK5 157 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 CDC42EP4Q9H3Q1 356 aaKnown RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 A1CFQ9NQ94 594 aaKnown RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 ADARB2Q9NS39 739 aaKnown RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SLC38A7Q9NVC3 462 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SPAG6O75602 509 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 PSMD10O75832 226 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SASH3O75995 380 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 RAP1GAPP47736 663 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 PTENP60484 403 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 OTUD4Q01804 1114 aaKnown RBP23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 STX3Q13277 289 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 ABRAQ8N0Z2 381 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 DNERQ8NFT8 737 aa23.44■■□□□ 1.34
CTDSPL-206ENST00000443503 SMAPO00193 183 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 KIF3CO14782 793 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 MTHFD1LQ6UB35 978 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 FRA10AC1Q70Z53 315 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 MYCBPAPQ8TBZ2 947 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 RANBP17Q9H2T7 1088 aaKnown RBP23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 VDRP11473 427 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 RECQLP46063 649 aaPredicted RBP23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 HSP90AA5PQ58FG0 334 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 C11orf63Q6NUN7 778 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 NDUFAF2Q8N183 169 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 ZNF606Q8WXB4 792 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 PRKAG2Q9UGJ0 569 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 GSTA4O15217 222 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 DDNO94850 711 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms