RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PMLP29590 882 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 KBTBD12Q3ZCT8 623 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 NADK2Q4G0N4 442 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 C12orf60Q5U649 245 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 GRAMD4Q6IC98 578 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 UTS2BQ765I0 119 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 ZSWIM2Q8NEG5 633 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 CELF1Q92879 486 aaKnown RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 AZIN2Q96A70 460 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 PTCD3Q96EY7 689 aaKnown RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 NR1H4Q96RI1 486 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 MRPL1Q9BYD6 325 aaKnown RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 PSTPIP2Q9H939 334 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 BTBD7Q9P203 1132 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 SAE1Q9UBE0 346 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 LMO7Q8WWI1 1683 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 C15orf38-AP3S2A0A0A6YYH1 394 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 E2F8A0AVK6 867 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 PRR5-ARHGAP8B1AHC4 643 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 DDX39AO00148 427 aaKnown RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 LPXNO60711 386 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 MT-ND3P03897 115 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 C6orf222P0C671 652 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 VCLP18206 1134 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 ARHGAP8P85298 464 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 TMPRSS15P98073 1019 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 CDK16Q00536 496 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 CYLC2Q14093 348 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 C16orf72Q14CZ0 275 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 PPP1R2P3Q6NXS1 205 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 KLHDC10Q6PID8 442 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 OLFML1Q6UWY5 402 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 ARPINQ7Z6K5 226 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 SESTD1Q86VW0 696 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 PPP1R14CQ8TAE6 165 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 CATSPER2Q96P56 530 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 CSRNP1Q96S65 589 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 SLX1AQ9BQ83 275 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 DCLK3Q9C098 648 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 ARMC7Q9H6L4 198 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 MAP3K20Q9NYL2 800 aaKnown RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-214ENST00000441542 ZBTB21Q9ULJ3 1066 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 AKAP11Q9UKA4 1901 aa7.91□□□□□ -1.14
HDAC9-214ENST00000441542 A0A1B0GTW7 788 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 SGK1O00141 431 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 PIK3R2O00459 728 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 BCRP11274 1271 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 ALOX15P16050 662 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-214ENST00000441542 KCNA2P16389 499 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 IVDP26440 423 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 HIBADHP31937 336 aaKnown RBP7.9□□□□□ -1.14
HDAC9-214ENST00000441542 MLH1P40692 756 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 VASPP50552 380 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-214ENST00000441542 PPIDQ08752 370 aaKnown RBP7.9□□□□□ -1.14
HDAC9-214ENST00000441542 PDK1Q15118 436 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 GSTA3Q16772 222 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 C1orf228Q6PIY5 440 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 RHBDF2Q6PJF5 856 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 DENND5BQ6ZUT9 1274 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 ZNF554Q86TJ5 538 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 TTC30AQ86WT1 665 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 RNF148Q8N7C7 305 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 CYP2W1Q8TAV3 490 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 PPP1R36Q96LQ0 422 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 PLVAPQ9BX97 442 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 INO80BQ9C086 356 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-214ENST00000441542 SAR1AQ9NR31 198 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 IKBKGQ9Y6K9 419 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 MROH7Q68CQ1 1323 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 TTLL13PA6NNM8 815 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 H3BSA7 217 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 TGFB1I1O43294 461 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 RAG1P15918 1043 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 GCAP28676 217 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 HOXA13P31271 388 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-214ENST00000441542 STT3AP46977 705 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 CDK8P49336 464 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 MAPK10P53779 464 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 NRLP54845 237 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 NAA20P61599 178 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 PDE1BQ01064 536 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 MAP7D1Q3KQU3 841 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 RINT1Q6NUQ1 792 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 B3GNT6Q6ZMB0 384 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 SAMD3Q8N6K7 520 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 AGR3Q8TD06 166 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 DENND1AQ8TEH3 1009 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 APOL6Q9BWW8 343 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 GPR88Q9GZN0 384 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 BRD8Q9H0E9 1235 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 ADAMTS6Q9UKP5 1117 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 NENFQ9UMX5 172 aa7.9□□□□□ -1.14
HDAC9-214ENST00000441542 SMG5Q9UPR3 1016 aaKnown RBP7.9□□□□□ -1.14
HDAC9-214ENST00000441542 PHRF1Q9P1Y6 1649 aaKnown RBP7.9□□□□□ -1.15
HDAC9-214ENST00000441542 SPEF2Q9C093 1822 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 PDXKO00764 312 aa7.9□□□□□ -1.15
HDAC9-214ENST00000441542 CYB561D2O14569 222 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms