RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 DLGAP2Q9P1A6 1054 aa20.23■□□□□ 0.83
CCDC78-204ENST00000439619 PCDHA7Q9UN72 937 aa20.23■□□□□ 0.83
CCDC78-204ENST00000439619 SNX9Q9Y5X1 595 aa20.23■□□□□ 0.83
CCDC78-204ENST00000439619 PVALEFA0A1B0GWK0 134 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 PRR23AA6NEV1 266 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 HEPACAM2A8MVW5 462 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 LAMTOR5O43504 91 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 SOAT2O75908 522 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 VIPR2P41587 438 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 LHX1P48742 406 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 GPR158Q5T848 1215 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 RESP18Q5W5W9 173 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 C1orf228Q6PIY5 440 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 PDCL2Q8N4E4 241 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 TTC9BQ8N6N2 239 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 TOP6BLQ8N6T0 577 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 ZSWIM2Q8NEG5 633 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 ZNF507Q8TCN5 953 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 HPS3Q969F9 1004 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 FNBP1Q96RU3 617 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 ZNF334Q9HCZ1 680 aaPredicted RBP20.22■□□□□ 0.83
CCDC78-204ENST00000439619 INTS13Q9NVM9 706 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 GDAP2Q9NXN4 497 aa20.22■□□□□ 0.83
CCDC78-204ENST00000439619 DDX43Q9NXZ2 648 aaKnown RBP20.22■□□□□ 0.83
CCDC78-204ENST00000439619 CGNQ9P2M7 1197 aaKnown RBP20.22■□□□□ 0.83
CCDC78-204ENST00000439619 PRPF40AO75400 957 aaKnown RBP20.21■□□□□ 0.83
CCDC78-204ENST00000439619 HAPLN1P10915 354 aaPredicted RBP20.21■□□□□ 0.83
CCDC78-204ENST00000439619 GLULP15104 373 aa20.21■□□□□ 0.83
CCDC78-204ENST00000439619 CD72P21854 359 aa20.21■□□□□ 0.83
CCDC78-204ENST00000439619 PCSK1P29120 753 aa20.21■□□□□ 0.83
CCDC78-204ENST00000439619 RPL10AP62906 217 aaKnown RBP20.21■□□□□ 0.83
CCDC78-204ENST00000439619 POTEHQ6S545 545 aa20.21■□□□□ 0.83
CCDC78-204ENST00000439619 DPH6Q7L8W6 267 aa20.21■□□□□ 0.83
CCDC78-204ENST00000439619 WDR49Q8IV35 697 aa20.21■□□□□ 0.83
CCDC78-204ENST00000439619 ARID3BQ8IVW6 561 aaPredicted RBP20.21■□□□□ 0.83
CCDC78-204ENST00000439619 MSANTD3Q96H12 275 aa20.21■□□□□ 0.83
CCDC78-204ENST00000439619 LPIN3Q9BQK8 851 aa20.21■□□□□ 0.83
CCDC78-204ENST00000439619 RPS9P46781 194 aaKnown RBP20.2■□□□□ 0.82
CCDC78-204ENST00000439619 WNT7BP56706 349 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 DNM1Q05193 864 aaKnown RBP20.2■□□□□ 0.82
CCDC78-204ENST00000439619 SNRNP35Q16560 246 aaKnown RBP20.2■□□□□ 0.82
CCDC78-204ENST00000439619 EPM2AIP1Q7L775 607 aaPredicted RBP20.2■□□□□ 0.82
CCDC78-204ENST00000439619 ASCL5Q7RTU5 278 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 LRRTM3Q86VH5 581 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 CBWD2Q8IUF1 395 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 ADGRF2Q8IZF7 708 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 GLIS3Q8NEA6 775 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 GOLGA5Q8TBA6 731 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 GIPC2Q8TF65 315 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 LEO1Q8WVC0 666 aaPredicted RBP20.2■□□□□ 0.82
CCDC78-204ENST00000439619 HPDLQ96IR7 371 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 TASP1Q9H6P5 420 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 ABCB6Q9NP58 842 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 AGPAT3Q9NRZ7 376 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 OBP2AQ9NY56 170 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 RCOR1Q9UKL0 485 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 L1RE1Q9UN81 338 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 PIAS3Q9Y6X2 628 aa20.2■□□□□ 0.82
CCDC78-204ENST00000439619 CACNA1HO95180 2353 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-204ENST00000439619 CHADO15335 359 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 LRRN2O75325 713 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 SP9P0CG40 484 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 CSH1P0DML2 217 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 CSH2P0DML3 217 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 ATF6P18850 670 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 TNNI1P19237 187 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 AFMP43652 599 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 MLLT6P55198 1093 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-204ENST00000439619 PPP2R5DQ14738 602 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 INTS6LQ5JSJ4 861 aaKnown RBP20.19■□□□□ 0.82
CCDC78-204ENST00000439619 GAREM2Q75VX8 874 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 SPATA2LQ8IUW3 424 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-204ENST00000439619 NELFCDQ8IXH7 590 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 XXYLT1Q8NBI6 393 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 FAM3CQ92520 227 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 BLZF1Q9H2G9 400 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 THG1LQ9NWX6 298 aaKnown RBP20.19■□□□□ 0.82
CCDC78-204ENST00000439619 FBXO4Q9UKT5 387 aa20.19■□□□□ 0.82
CCDC78-204ENST00000439619 MTF2Q9Y483 593 aaPredicted RBP20.19■□□□□ 0.82
CCDC78-204ENST00000439619 SLFN14P0C7P3 912 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 DLATP10515 647 aaKnown RBP20.18■□□□□ 0.82
CCDC78-204ENST00000439619 TARSP26639 723 aaKnown RBP20.18■□□□□ 0.82
CCDC78-204ENST00000439619 WEE1P30291 646 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 CYP2J2P51589 502 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 KPNA1P52294 538 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-204ENST00000439619 MAPRE1Q15691 268 aaKnown RBP20.18■□□□□ 0.82
CCDC78-204ENST00000439619 ZNF528Q3MIS6 628 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 ARHGAP29Q52LW3 1261 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 LMBRD2Q68DH5 695 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-204ENST00000439619 C4orf50Q6ZRC1 276 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 RDH13Q8NBN7 331 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 CLDN23Q96B33 292 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 IER2Q9BTL4 223 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 PI4K2AQ9BTU6 479 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 C8orf33Q9H7E9 229 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-204ENST00000439619 UXTQ9UBK9 157 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-204ENST00000439619 USP25Q9UHP3 1055 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 SIX4Q9UIU6 781 aa20.18■□□□□ 0.82
CCDC78-204ENST00000439619 NDRG2Q9UN36 371 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms