RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 DNAJC25Q9H1X3 360 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 CRISPLD1Q9H336 500 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 MAGEF1Q9HAY2 307 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 TBC1D7Q9P0N9 293 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
IRF1-204ENST00000439555 ANGPTL2Q9UKU9 493 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 SPAG17Q6Q759 2223 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
IRF1-204ENST00000439555 OR4Q2P0C623 313 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 TDGF1P13385 188 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 MLLT6P55198 1093 aaPredicted RBP12.37□□□□□ -0.43
IRF1-204ENST00000439555 SPEM2Q0P670 501 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 DNAJB7Q7Z6W7 309 aaPredicted RBP12.37□□□□□ -0.43
IRF1-204ENST00000439555 ITIH5Q86UX2 942 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 TMC8Q8IU68 726 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 HSCBQ8IWL3 235 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 HS6ST3Q8IZP7 471 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 LRRC52Q8N7C0 313 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 PDILTQ8N807 584 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 OR10T2Q8NGX3 314 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 SPATA18Q8TC71 538 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 IRF7Q92985 503 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 PSMG2Q969U7 264 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 PGLYRP2Q96PD5 576 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 PYM1Q9BRP8 204 aaKnown RBP12.37□□□□□ -0.43
IRF1-204ENST00000439555 TRMT61BQ9BVS5 477 aaKnown RBP12.37□□□□□ -0.43
IRF1-204ENST00000439555 PLA2G2FQ9BZM2 168 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 TRIM9Q9C026 710 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 IKZF4Q9H2S9 585 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 KIAA1586Q9HCI6 787 aa12.37□□□□□ -0.43
IRF1-204ENST00000439555 RBAKQ9NYW8 714 aaPredicted RBP12.37□□□□□ -0.43
IRF1-204ENST00000439555 ASPMQ8IZT6 3477 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 EIF3DO15371 548 aaKnown RBP eCLIP12.36□□□□□ -0.43
IRF1-204ENST00000439555 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
IRF1-204ENST00000439555 MYL4P12829 197 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 PSMC3P17980 439 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 TARSP26639 723 aaKnown RBP12.36□□□□□ -0.43
IRF1-204ENST00000439555 PMLP29590 882 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 WEE1P30291 646 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 CNR2P34972 360 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 LIMK1P53667 647 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
IRF1-204ENST00000439555 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
IRF1-204ENST00000439555 DMWDQ09019 674 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 SURF1Q15526 300 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 WSCD1Q658N2 575 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 MFSD6LQ8IWD5 586 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 DCP1BQ8IZD4 617 aaKnown RBP12.36□□□□□ -0.43
IRF1-204ENST00000439555 CXorf38Q8TB03 319 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 SHKBP1Q8TBC3 707 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 ZSCAN18Q8TBC5 510 aaPredicted RBP12.36□□□□□ -0.43
IRF1-204ENST00000439555 SPPL2BQ8TCT7 592 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 ZSWIM3Q96MP5 696 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 C7orf25Q9BPX7 421 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 CBWD1Q9BRT8 395 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 CHRDQ9H2X0 955 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 SEMA4GQ9NTN9 838 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 GDAP2Q9NXN4 497 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 ZMYM5Q9UJ78 669 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 ITGA11Q9UKX5 1188 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 SLC27A5Q9Y2P5 690 aa12.36□□□□□ -0.43
IRF1-204ENST00000439555 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.36□□□□□ -0.43
IRF1-204ENST00000439555 CNOT1A5YKK6 2376 aaKnown RBP12.36□□□□□ -0.43
IRF1-204ENST00000439555 F5P12259 2224 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.35□□□□□ -0.43
IRF1-204ENST00000439555 MAN2B1O00754 1011 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 PRPF6O94906 941 aaKnown RBP12.35□□□□□ -0.43
IRF1-204ENST00000439555 HSP90AA1P07900 732 aaKnown RBP12.35□□□□□ -0.43
IRF1-204ENST00000439555 CD72P21854 359 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 RBP5P82980 135 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 MTAPQ13126 283 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 VEPH1Q14D04 833 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 TEAD2Q15562 447 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 NFE2Q16621 373 aaPredicted RBP12.35□□□□□ -0.43
IRF1-204ENST00000439555 SLC39A12Q504Y0 691 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 TSSK4Q6SA08 328 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 PRR23CQ6ZRP0 262 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 EPM2AIP1Q7L775 607 aaPredicted RBP12.35□□□□□ -0.43
IRF1-204ENST00000439555 ZNF687Q8N1G0 1237 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 TMEM86AQ8N2M4 240 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 GPD1LQ8N335 351 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 C1orf127Q8N9H9 656 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 ZNF507Q8TCN5 953 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 SAAL1Q96ER3 474 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 MSANTD3Q96H12 275 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 TMEM209Q96SK2 561 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 ACBD6Q9BR61 282 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 FGFBP2Q9BYJ0 223 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 BRD9Q9H8M2 597 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 OBP2AQ9NY56 170 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 AGAP1Q9UPQ3 857 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 TICRRQ7Z2Z1 1910 aa12.35□□□□□ -0.43
IRF1-204ENST00000439555 COL4A2P08572 1712 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 TRIP11Q15643 1979 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 CITO14578 2027 aa12.34□□□□□ -0.43
IRF1-204ENST00000439555 PVALEFA0A1B0GWK0 134 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms