RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 CXCL14O95715 111 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 ADH1AP07327 375 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 PAEPP09466 180 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 CCDC172P0C7W6 258 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 DNAJB1P25685 340 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 NDST1P52848 882 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 ERVFC1P60507 584 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 RAPGEF1Q13905 1077 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 CAMK1Q14012 370 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 NFE2Q16621 373 aaPredicted RBP19.62■□□□□ 0.73
HDAC6-208ENST00000438518 ARHGAP44Q17R89 818 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 INTS6LQ5JSJ4 861 aaKnown RBP19.62■□□□□ 0.73
HDAC6-208ENST00000438518 HABP4Q5JVS0 413 aaKnown RBP19.62■□□□□ 0.73
HDAC6-208ENST00000438518 GJB7Q6PEY0 223 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 OSTM1Q86WC4 334 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 CRYBG2Q8N1P7 616 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 MICAL1Q8TDZ2 1067 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 GDPD5Q8WTR4 605 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 C2orf15Q8WU43 125 aaKnown RBP19.62■□□□□ 0.73
HDAC6-208ENST00000438518 ELMO3Q96BJ8 720 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 B3GALT6Q96L58 329 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 MAFFQ9ULX9 164 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 PCDHB4Q9Y5E5 795 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 CHD9Q3L8U1 2897 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 ATG2AQ2TAZ0 1938 aa19.62■□□□□ 0.73
HDAC6-208ENST00000438518 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-208ENST00000438518 F8VZ95 297 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 SOX1O00570 391 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-208ENST00000438518 EPHB6O15197 1021 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 ADCY5O95622 1261 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 STAT1P42224 750 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 JAM2P57087 298 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 BPIFB4P59827 614 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 APBA1Q02410 837 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 DRAP1Q14919 205 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-208ENST00000438518 TMEM270Q6UE05 265 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 PRSS55Q6UWB4 352 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-208ENST00000438518 PPFIBP1Q86W92 1011 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 ANP32BQ92688 251 aaKnown RBP19.61■□□□□ 0.73
HDAC6-208ENST00000438518 KAT5Q92993 513 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 TMEM176AQ96HP8 235 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 RTP3Q9BQQ7 232 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 SYT15Q9BQS2 421 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 ZCWPW1Q9H0M4 648 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 TTYH1Q9H313 450 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-208ENST00000438518 CAPN11Q9UMQ6 739 aa19.61■□□□□ 0.73
HDAC6-208ENST00000438518 C2orf71A6NGG8 1288 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 EPOPA6NHQ4 379 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 C2CD2LO14523 706 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 POU3F3P20264 500 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-208ENST00000438518 ZNF132P52740 706 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 GPR17Q13304 367 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 RAB33AQ14088 237 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 STILQ15468 1287 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 PLPP4Q5VZY2 271 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 TPGS2Q68CL5 300 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 FAM71AQ8IYT1 594 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 RBBP8NLQ8NC74 664 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-208ENST00000438518 B3GALNT2Q8NCR0 500 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 WHAMMQ8TF30 809 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 CDCA3Q99618 268 aaPredicted RBP19.6■□□□□ 0.73
HDAC6-208ENST00000438518 CLSTN3Q9BQT9 956 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 NLRC4Q9NPP4 1024 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 HSFX1Q9UBD0 423 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 DPP7Q9UHL4 492 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 CDY1Q9Y6F8 540 aa19.6■□□□□ 0.73
HDAC6-208ENST00000438518 KRT5P13647 590 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 CPB1P15086 417 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 LMO2P25791 158 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 CA8P35219 290 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 SOX5P35711 763 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 RAD23BP54727 409 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 ZBED6P86452 979 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 PTK2Q05397 1052 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 FAM171BQ6P995 826 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 C4orf50Q6ZRC1 276 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 OR10T2Q8NGX3 314 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 MYCBPAPQ8TBZ2 947 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 FUBP3Q96I24 572 aaKnown RBP eCLIP19.59■□□□□ 0.73
HDAC6-208ENST00000438518 KLHL5Q96PQ7 755 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 GPR88Q9GZN0 384 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 IMPACTQ9P2X3 320 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 AJAP1Q9UKB5 411 aaPredicted RBP19.59■□□□□ 0.73
HDAC6-208ENST00000438518 LUC7L2Q9Y383 392 aaKnown RBP19.59■□□□□ 0.73
HDAC6-208ENST00000438518 CHD7Q9P2D1 2997 aa19.59■□□□□ 0.73
HDAC6-208ENST00000438518 ATP8B3O60423 1300 aa19.58■□□□□ 0.73
HDAC6-208ENST00000438518 GOLGA6L6A8MZA4 724 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 FOXN3O00409 490 aaPredicted RBP19.58■□□□□ 0.72
HDAC6-208ENST00000438518 TEX28O15482 410 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 GYPCP04921 128 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 CNPP09543 421 aaKnown RBP19.58■□□□□ 0.72
HDAC6-208ENST00000438518 VDRP11473 427 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 FERP16591 822 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 PTPN1P18031 435 aaKnown RBP19.58■□□□□ 0.72
HDAC6-208ENST00000438518 ROR1Q01973 937 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 ELMSAN1Q6PJG2 1045 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 RTL10Q7L3V2 364 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 TMC6Q7Z403 805 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 CNGA4Q8IV77 575 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 SLC4A11Q8NBS3 891 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms