RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TMEM176AQ96HP8 235 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 C16orf45Q96MC5 204 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-206ENST00000431390 PCDHB18PQ96TA0 734 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 ELOVL4Q9GZR5 314 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 TBC1D13Q9NVG8 400 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 CXXC1Q9P0U4 656 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-206ENST00000431390 THEGQ9P2T0 379 aa19.41■□□□□ 0.7
HMGN1-206ENST00000431390 FNDC1Q4ZHG4 1894 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-206ENST00000431390 EFCAB14O75071 495 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 RTN2O75298 545 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 H2AFZP0C0S5 128 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 NDST1P52848 882 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 CCDC85BQ15834 202 aaPredicted RBP19.4■□□□□ 0.7
HMGN1-206ENST00000431390 H2AFVQ71UI9 128 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 PALB2Q86YC2 1186 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 ATXN2LQ8WWM7 1075 aaKnown RBP19.4■□□□□ 0.7
HMGN1-206ENST00000431390 CASD1Q96PB1 797 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 MRPL45Q9BRJ2 306 aaKnown RBP19.4■□□□□ 0.7
HMGN1-206ENST00000431390 NT5C1AQ9BXI3 368 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 LACRTQ9GZZ8 138 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 ISCUQ9H1K1 167 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 NKX2-4Q9H2Z4 354 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 IL23AQ9NPF7 189 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 TCF20Q9UGU0 1960 aaKnown RBP19.4■□□□□ 0.7
HMGN1-206ENST00000431390 PUF60Q9UHX1 559 aaKnown RBP19.4■□□□□ 0.7
HMGN1-206ENST00000431390 KIAA1257Q9ULG3 409 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 PCDHGC3Q9UN70 934 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 L1RE1Q9UN81 338 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 MED7O43513 233 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 CALCAP01258 141 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 CYP1A1P04798 512 aaPredicted RBP19.4■□□□□ 0.7
HMGN1-206ENST00000431390 IGFBP4P22692 258 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 RAB30Q15771 203 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 CLEC16AQ2KHT3 1053 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 PPP1R2P3Q6NXS1 205 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 DCLRE1AQ6PJP8 1040 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 C3orf58Q8NDZ4 430 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 KBTBD7Q8WVZ9 684 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 HERVK_113Q902F9 699 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 TWNKQ96RR1 684 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 PAAF1Q9BRP4 392 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 MRPL9Q9BYD2 267 aaKnown RBP19.4■□□□□ 0.7
HMGN1-206ENST00000431390 DNAI2Q9GZS0 605 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 PDCL3Q9H2J4 239 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 MYO1AQ9UBC5 1043 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 CACNG4Q9UBN1 327 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 HMGXB4Q9UGU5 601 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 MSRAQ9UJ68 235 aa19.4■□□□□ 0.7
HMGN1-206ENST00000431390 BTNL10A8MVZ5 291 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 CYB561D2O14569 222 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 VDRP11473 427 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 WARSP23381 471 aaKnown RBP19.39■□□□□ 0.69
HMGN1-206ENST00000431390 RNASELQ05823 741 aaKnown RBP19.39■□□□□ 0.69
HMGN1-206ENST00000431390 COLGALT2Q8IYK4 626 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 TMEM86AQ8N2M4 240 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 PDCL2Q8N4E4 241 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 SPATA18Q8TC71 538 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 SENP8Q96LD8 212 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 FAM193BQ96PV7 902 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-206ENST00000431390 ASB2Q96Q27 587 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 PACSIN1Q9BY11 444 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 TAS2R14Q9NYV8 317 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 CHD9Q3L8U1 2897 aa19.39■□□□□ 0.69
HMGN1-206ENST00000431390 ARHGEF37A1IGU5 675 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 ANKRD62A6NC57 917 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 TMEM189-UBE2V1I3L0A0 370 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 B3GAT3O94766 335 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 DDHD2O94830 711 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 TMEM253P0C7T8 217 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 UNGP13051 313 aaPredicted RBP19.38■□□□□ 0.69
HMGN1-206ENST00000431390 CD19P15391 556 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 BRD2P25440 801 aaKnown RBP19.38■□□□□ 0.69
HMGN1-206ENST00000431390 DSTYKQ6XUX3 929 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.38■□□□□ 0.691e-8■■■□□ 16.2
HMGN1-206ENST00000431390 OTOP2Q7RTS6 562 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 ZNF280BQ86YH2 543 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 ADGRF2Q8IZF7 708 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 OR6B3Q8NGW1 331 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 SNX25Q9H3E2 840 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 TRIM10Q9UDY6 481 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 GUCA1BQ9UMX6 200 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 TFR2Q9UP52 801 aa19.38■□□□□ 0.69
HMGN1-206ENST00000431390 YBX2Q9Y2T7 364 aaKnown RBP19.38■□□□□ 0.69
HMGN1-206ENST00000431390 KIF5CO60282 957 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 BAIAP3O94812 1187 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 LSM8O95777 96 aaKnown RBP19.37■□□□□ 0.69
HMGN1-206ENST00000431390 ABL1P00519 1130 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 FGBP02675 491 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 TNNT1P13805 278 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 GALCP54803 685 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 ETF1P62495 437 aaKnown RBP19.37■□□□□ 0.69
HMGN1-206ENST00000431390 CENPCQ03188 943 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 STILQ15468 1287 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 ACAD10Q6JQN1 1059 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 CD300LGQ6UXG3 332 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 RNF10Q8N5U6 811 aaKnown RBP19.37■□□□□ 0.69
HMGN1-206ENST00000431390 ADAMTS19Q8TE59 1207 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 TFAP2BQ92481 460 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 ZSWIM1Q9BR11 485 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 ZNF518BQ9C0D4 1074 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms