RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 TDRD12Q587J7 1177 aaKnown RBP18.18■□□□□ 0.5
LINC00887-203ENST00000429578 FAM171A1Q5VUB5 890 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 CYP26C1Q6V0L0 522 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 OSTM1Q86WC4 334 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 TMTC1Q8IUR5 882 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 RNF168Q8IYW5 571 aaPredicted RBP18.18■□□□□ 0.5
LINC00887-203ENST00000429578 SLC4A11Q8NBS3 891 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 EPS8L1Q8TE68 723 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 TMEM176AQ96HP8 235 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 ELOVL4Q9GZR5 314 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 HAUS4Q9H6D7 363 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 ACP6Q9NPH0 428 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 DDX43Q9NXZ2 648 aaKnown RBP18.18■□□□□ 0.5
LINC00887-203ENST00000429578 MSRAQ9UJ68 235 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 EYSQ5T1H1 3165 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 FGFR3P22607 806 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 LMO2P25791 158 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 TKTP29401 623 aaKnown RBP18.18■□□□□ 0.5
LINC00887-203ENST00000429578 GNA15P30679 374 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 DEKP35659 375 aaKnown RBP18.18■□□□□ 0.5
LINC00887-203ENST00000429578 PDE6CP51160 858 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 YWHAHQ04917 246 aaPredicted RBP18.18■□□□□ 0.5
LINC00887-203ENST00000429578 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 RAB30Q15771 203 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 OVOS1Q6IE37 1185 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
LINC00887-203ENST00000429578 DNAI2Q9GZS0 605 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 RWDD3Q9Y3V2 267 aa18.18■□□□□ 0.5
LINC00887-203ENST00000429578 SSU72P8A0A1W2PR75 194 aa18.17■□□□□ 0.5
LINC00887-203ENST00000429578 LINC01553A4QN01 128 aa18.17■□□□□ 0.5
LINC00887-203ENST00000429578 NRDCO43847 1150 aa18.17■□□□□ 0.5
LINC00887-203ENST00000429578 OAZ2O95190 189 aa18.17■□□□□ 0.5
LINC00887-203ENST00000429578 PLEKP08567 350 aaPredicted RBP18.17■□□□□ 0.5
LINC00887-203ENST00000429578 CCZ1BP86790 482 aa18.17■□□□□ 0.5
LINC00887-203ENST00000429578 CCZ1P86791 482 aaPredicted RBP18.17■□□□□ 0.5
LINC00887-203ENST00000429578 ORC1Q13415 861 aa18.17■□□□□ 0.5
LINC00887-203ENST00000429578 CRYBG2Q8N1P7 616 aa18.17■□□□□ 0.5
LINC00887-203ENST00000429578 MAFAQ8NHW3 353 aaPredicted RBP18.17■□□□□ 0.5
LINC00887-203ENST00000429578 NOCTQ9UK39 431 aaKnown RBP18.17■□□□□ 0.5
LINC00887-203ENST00000429578 PCDHA11Q9Y5I1 949 aa18.17■□□□□ 0.5
LINC00887-203ENST00000429578 HCRTO43612 131 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 PDGFRBP09619 1106 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 MYOGP15173 224 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 MAPK8IP2Q13387 824 aaPredicted RBP18.16■□□□□ 0.5
LINC00887-203ENST00000429578 ACOT1Q86TX2 421 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 NOP9Q86U38 636 aaKnown RBP18.16■□□□□ 0.5
LINC00887-203ENST00000429578 CEP57Q86XR8 500 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 ZNF677Q86XU0 584 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 THEM5Q8N1Q8 247 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 TNIP3Q96KP6 325 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 ZNF830Q96NB3 372 aaPredicted RBP18.16■□□□□ 0.5
LINC00887-203ENST00000429578 ACBD6Q9BR61 282 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 VN1R3Q9BXE9 311 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 KCNF1Q9H3M0 494 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 NHEJ1Q9H9Q4 299 aaPredicted RBP18.16■□□□□ 0.5
LINC00887-203ENST00000429578 KIAA1257Q9ULG3 409 aa18.16■□□□□ 0.5
LINC00887-203ENST00000429578 PCSK1P29120 753 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 BMPR1AP36894 532 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 USP41Q3LFD5 358 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 VARS2Q5ST30 1063 aaKnown RBP18.15■□□□□ 0.5
LINC00887-203ENST00000429578 ZNF571Q7Z3V5 609 aaPredicted RBP18.15■□□□□ 0.5
LINC00887-203ENST00000429578 DDX53Q86TM3 631 aaKnown RBP18.15■□□□□ 0.5
LINC00887-203ENST00000429578 ZNF606Q8WXB4 792 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 DDX1Q92499 740 aaKnown RBP18.15■□□□□ 0.5
LINC00887-203ENST00000429578 HEXIM2Q96MH2 286 aaKnown RBP18.15■□□□□ 0.5
LINC00887-203ENST00000429578 RTP3Q9BQQ7 232 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 SYT11Q9BT88 431 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 TTPALQ9BTX7 342 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 DPEP3Q9H4B8 488 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 STK39Q9UEW8 545 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 PUF60Q9UHX1 559 aaKnown RBP18.15■□□□□ 0.5
LINC00887-203ENST00000429578 SOWAHDA6NJG2 315 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 THAP12O43422 761 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 FGF18O76093 207 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 CALCAP01258 141 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 SOD2P04179 222 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 CA3P07451 260 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 VDRP11473 427 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 CD19P15391 556 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 EIF4A3P38919 411 aaKnown RBP18.15■□□□□ 0.5
LINC00887-203ENST00000429578 CDR2Q01850 454 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 PLCB3Q01970 1234 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 KRT17Q04695 432 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 MRPL58Q14197 206 aaKnown RBP18.15■□□□□ 0.5
LINC00887-203ENST00000429578 RTP2Q5QGT7 225 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 TAS1R1Q7RTX1 841 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 B3GALNT2Q8NCR0 500 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 SLC20A1Q8WUM9 679 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 B3GALT6Q96L58 329 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 CCDC42Q96M95 316 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 AGPAT1Q99943 283 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 NKX2-4Q9H2Z4 354 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 CHST7Q9NS84 486 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 CDH9Q9ULB4 789 aa18.15■□□□□ 0.5
LINC00887-203ENST00000429578 DLL1O00548 723 aa18.14■□□□□ 0.49
LINC00887-203ENST00000429578 ARHGAP6O43182 974 aa18.14■□□□□ 0.49
LINC00887-203ENST00000429578 ACAT1P24752 427 aaKnown RBP18.14■□□□□ 0.49
LINC00887-203ENST00000429578 ANXA13P27216 316 aa18.14■□□□□ 0.49
LINC00887-203ENST00000429578 CTNNB1P35222 781 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms