RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CCDC194A0A1B0GVG4 234 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 EXOC1LA0A1B0GW35 172 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 PLEKHG3A1L390 1219 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 GTPBP10A4D1E9 387 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRIM49BA6NDI0 452 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 FAM196BA6NMK8 535 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 NEURL1BA8MQ27 555 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 FADS2P1A8MWK0 482 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 EVPLLA8MZ36 301 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CFAP99D6REC4 459 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 BOLA2-SMG1P6H3BVE0 249 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 KLF11O14901 512 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 AXIN1O15169 862 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 VILLO15195 856 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 ADCY6O43306 1168 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 NDUFB5O43674 189 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 SORBS3O60504 671 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 RNASEH1O60930 286 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZC3H11AO75152 810 aaKnown RBP eCLIP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 KLHL2O95198 593 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CBX6O95503 412 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 OXSR1O95747 527 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CYP1A1P04798 512 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 PLEKP08567 350 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 UQCRFS1P1P0C7P4 283 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 SRGAP2CP0DJJ0 459 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 SRGAP2BP0DMP2 458 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 T-ENOLP0DO92 83 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 MCF2P10911 925 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CDH2P19022 906 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CTNNA2P26232 953 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 GNA11P29992 359 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 FDFT1P37268 417 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 STAT1P42224 750 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLCO1A2P46721 670 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 POLR2FP61218 127 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 HAND2P61296 217 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 FOLH1Q04609 750 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 PTPN12Q05209 780 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 TMEM62Q0P6H9 643 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 WASHC5Q12768 1159 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 UBE4AQ14139 1066 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 MOGQ16653 247 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CTC1Q2NKJ3 1217 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 C15orf59Q2T9L4 293 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 KLHL38Q2WGJ6 581 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 NADK2Q4G0N4 442 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 C1orf141Q5JVX7 400 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLX4IPQ5VYV7 408 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 ANKRD40Q6AI12 368 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 TWF2Q6IBS0 349 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 KRT80Q6KB66 452 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 PPP4R4Q6NUP7 873 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CCDC137Q6PK04 289 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 UGT2A3Q6UWM9 527 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 RIPOR1Q6ZS17 1223 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 FAM47EQ6ZV65 393 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 GPR141Q7Z602 305 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 MTDHQ86UE4 582 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CHSY1Q86X52 802 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 COLGALT2Q8IYK4 626 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 RTKN2Q8IZC4 609 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 TTC30BQ8N4P2 665 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 USHBP1Q8N6Y0 703 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 RBM15BQ8NDT2 890 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 PDZD8Q8NEN9 1154 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 TOR1AIP2Q8NFQ8 470 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 OR7G1Q8NGA0 311 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 PNPT1Q8TCS8 783 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 DTX3LQ8TDB6 740 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 GIPC2Q8TF65 315 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 GDPD5Q8WTR4 605 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 NRG4Q8WWG1 115 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRUB1Q8WWH5 349 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 NRBF2Q96F24 287 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CEP95Q96GE4 821 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CEP19Q96LK0 163 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 GPR101Q96P66 508 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 YME1L1Q96TA2 773 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 RMDN3Q96TC7 470 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CTRCQ99895 268 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 LSM14BQ9BX40 385 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 TDRD1Q9BXT4 1180 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRIM31Q9BZY9 425 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 RBM38Q9H0Z9 239 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 EPB41L4BQ9H329 900 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CDC42EP4Q9H3Q1 356 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 SEMA4AQ9H3S1 761 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 HIPK3Q9H422 1215 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF287Q9HBT7 754 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 DDX18Q9NVP1 670 aaKnown RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 KIAA1522Q9P206 1035 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 PSMC3IPQ9P2W1 217 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 RABL2AQ9UBK7 228 aaPredicted RBP5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 SEL1LQ9UBV2 794 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 ADAMTS1Q9UHI8 967 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 NAGPAQ9UK23 515 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 CDH7Q9ULB5 785 aa5.88□□□□□ -1.47
VTI1BP4-201ENST00000427516 DNM3Q9UQ16 869 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms