RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-215	ENST00000427487	KRT5	P13647	590 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	CYP11B1	P15538	503 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	IGFBP6	P24592	240 aa	Predicted RBP	12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	PDE6C	P51160	858 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	NDST1	P52848	882 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	KLHL30	Q0D2K2	578 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	LRIT3	Q3SXY7	679 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	VARS2	Q5ST30	1063 aa	Known RBP	12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	FAM171B	Q6P995	826 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	TRIM72	Q6ZMU5	477 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	TMEM173	Q86WV6	379 aa	Predicted RBP	12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	SYT11	Q9BT88	431 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	PBX4	Q9BYU1	374 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	DDX43	Q9NXZ2	648 aa	Known RBP	12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	FNIP2	Q9P278	1114 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	HSFX1	Q9UBD0	423 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	MTRR	Q9UBK8	725 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	PCDHGC3	Q9UN70	934 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	NLRC5	Q86WI3	1866 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	ATP8B3	O60423	1300 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	VWA8	A3KMH1	1905 aa		12.84	□□□□□ -0.35
HDLBP-215	ENST00000427487	TMEM265	A0A087WTH1	108 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	LCHN	A4D1U4	455 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	NT5C1B-RDH14	C9J2C7	533 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487		F8W810	466 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	CYP26A1	O43174	497 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	CA3	P07451	260 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	CTSA	P10619	480 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	CD58	P19256	250 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	TKT	P29401	623 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	GNA15	P30679	374 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	GLUD2	P49448	558 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	TSPY1	Q01534	308 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	CDR2	Q01850	454 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	CNGA2	Q16280	664 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	NFE2	Q16621	373 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	SGO2	Q562F6	1265 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	INTS6L	Q5JSJ4	861 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	KIAA0319	Q5VV43	1072 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	E4F1	Q66K89	784 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	SLC8B1	Q6J4K2	584 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	OSTM1	Q86WC4	334 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	DCP1B	Q8IZD4	617 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	KLHL23	Q8NBE8	558 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	B3GALNT2	Q8NCR0	500 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	MYCBPAP	Q8TBZ2	947 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	HASPIN	Q8TF76	798 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	C2orf15	Q8WU43	125 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	DDX1	Q92499	740 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	RABGGTA	Q92696	567 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	CEP295NL	Q96MC4	621 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	PKMYT1	Q99640	499 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	BAG1	Q99933	345 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	ZNF518B	Q9C0D4	1074 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	ELOVL4	Q9GZR5	314 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	LMAN2L	Q9H0V9	348 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	ZBP1	Q9H171	429 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	LHX5	Q9H2C1	402 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	RXFP1	Q9HBX9	757 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	NGRN	Q9NPE2	291 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	PCDH10	Q9P2E7	1040 aa		12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487	NOCT	Q9UK39	431 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-215	ENST00000427487		H3BNC9	293 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	ARHGAP6	O43182	974 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	LILRB3	O75022	631 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	LSM8	O95777	96 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	UROD	P06132	367 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	PTMA	P06454	111 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	GZMA	P12544	262 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	PTPN1	P18031	435 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	CDH5	P33151	784 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	CTNNB1	P35222	781 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	PBX3	P40426	434 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	USP8	P40818	1118 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	RAP1GAP	P47736	663 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	RABGGTB	P53611	331 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	TAP1	Q03518	808 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	ASTE1	Q2TB18	679 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	C10orf76	Q5T2E6	689 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	KIAA1841	Q6NSI8	718 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	LCLAT1	Q6UWP7	414 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	RTL10	Q7L3V2	364 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	TMEM139	Q8IV31	216 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	LNX1	Q8TBB1	728 aa	Predicted RBP	12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	ZNF606	Q8WXB4	792 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	ELMO3	Q96BJ8	720 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	TWNK	Q96RR1	684 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	HNRNPAB	Q99729	332 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	RTP3	Q9BQQ7	232 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	SYT15	Q9BQS2	421 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	VN1R3	Q9BXE9	311 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	ZCWPW1	Q9H0M4	648 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	HAUS4	Q9H6D7	363 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	ABCB6	Q9NP58	842 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	ARHGAP20	Q9P2F6	1191 aa		12.82	□□□□□ -0.36
HDLBP-215	ENST00000427487	GBF1	Q92538	1859 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms