RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 SSX2IPQ9Y2D8 614 aa12.67□□□□□ -0.38
POLR1B-205ENST00000424062 OR6C75A6NL08 312 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 THAP12O43422 761 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 EFEMP2O95967 443 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 VDRP11473 427 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 CYP11B1P15538 503 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
POLR1B-205ENST00000424062 GNA15P30679 374 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 PBX2P40425 430 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 PRKCIP41743 596 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 PDE6CP51160 858 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 ERVK-21P61565 698 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 MRPL58Q14197 206 aaKnown RBP12.66□□□□□ -0.38
POLR1B-205ENST00000424062 MEA1Q16626 185 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 CTXN3Q4LDR2 81 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 SGO2Q562F6 1265 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 TDRD12Q587J7 1177 aaKnown RBP12.66□□□□□ -0.38
POLR1B-205ENST00000424062 ZNF280DQ6N043 979 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 SLC47A2Q86VL8 602 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 ZNF677Q86XU0 584 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 LRRC8AQ8IWT6 810 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 DCP1BQ8IZD4 617 aaKnown RBP12.66□□□□□ -0.38
POLR1B-205ENST00000424062 VPS52Q8N1B4 723 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 SLC4A11Q8NBS3 891 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 CCDC112Q8NEF3 446 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 WHAMMQ8TF30 809 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 RIN2Q8WYP3 895 aaPredicted RBP12.66□□□□□ -0.38
POLR1B-205ENST00000424062 AGPAT1Q99943 283 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 C17orf80Q9BSJ5 609 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 C11orf84Q9BUA3 381 aaPredicted RBP12.66□□□□□ -0.38
POLR1B-205ENST00000424062 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.66□□□□□ -0.38
POLR1B-205ENST00000424062 PBX4Q9BYU1 374 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 NKX2-4Q9H2Z4 354 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 HAUS4Q9H6D7 363 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 LZTS1Q9Y250 596 aa12.66□□□□□ -0.38
POLR1B-205ENST00000424062 YBX2Q9Y2T7 364 aaKnown RBP12.66□□□□□ -0.38
POLR1B-205ENST00000424062 C5orf67F2Z3F1 127 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 CXCL14O95715 111 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 URODP06132 367 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 LINC00271P0C7V0 271 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 ACAT1P24752 427 aaKnown RBP12.65□□□□□ -0.38
POLR1B-205ENST00000424062 ANXA13P27216 316 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 GLUD2P49448 558 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 SMAD3P84022 425 aaKnown RBP12.65□□□□□ -0.38
POLR1B-205ENST00000424062 DSG1Q02413 1049 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 CREMQ03060 361 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 TAP1Q03518 808 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 UBE3AQ05086 875 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 ORC1Q13415 861 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 STILQ15468 1287 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 MAPRE1Q15691 268 aaKnown RBP12.65□□□□□ -0.38
POLR1B-205ENST00000424062 WDR59Q6PJI9 974 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 GPR65Q8IYL9 337 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 B3GALNT2Q8NCR0 500 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 ZNF606Q8WXB4 792 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 B3GALT6Q96L58 329 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 CCDC42Q96M95 316 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 TWNKQ96RR1 684 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 SYT15Q9BQS2 421 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 SLC28A3Q9HAS3 691 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 MRPL17Q9NRX2 175 aaKnown RBP12.65□□□□□ -0.38
POLR1B-205ENST00000424062 CHST7Q9NS84 486 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 SEPT11Q9NVA2 429 aaKnown RBP12.65□□□□□ -0.38
POLR1B-205ENST00000424062 HMGXB4Q9UGU5 601 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 MTUS1Q9ULD2 1270 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
POLR1B-205ENST00000424062 PDE4DIPQ5VU43 2346 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 SSU72P8A0A1W2PR75 194 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 C2CD2LO14523 706 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 LPXNO60711 386 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 ATP2C2O75185 946 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 BRD2P25440 801 aaKnown RBP12.64□□□□□ -0.39
POLR1B-205ENST00000424062 EIF4A3P38919 411 aaKnown RBP12.64□□□□□ -0.39
POLR1B-205ENST00000424062 CDR2Q01850 454 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 GPM6BQ13491 265 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 CNGA2Q16280 664 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 PSMD5Q16401 504 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 INTS6LQ5JSJ4 861 aaKnown RBP12.64□□□□□ -0.39
POLR1B-205ENST00000424062 RTP2Q5QGT7 225 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 KIAA0319Q5VV43 1072 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 E4F1Q66K89 784 aaPredicted RBP12.64□□□□□ -0.39
POLR1B-205ENST00000424062 PPP2R2DQ66LE6 453 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 ZNF571Q7Z3V5 609 aaPredicted RBP12.64□□□□□ -0.39
POLR1B-205ENST00000424062 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 NOP9Q86U38 636 aaKnown RBP12.64□□□□□ -0.39
POLR1B-205ENST00000424062 CCDC170Q8IYT3 715 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 RNF168Q8IYW5 571 aaPredicted RBP12.64□□□□□ -0.39
POLR1B-205ENST00000424062 LNX1Q8TBB1 728 aaPredicted RBP12.64□□□□□ -0.39
POLR1B-205ENST00000424062 MYCBPAPQ8TBZ2 947 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 SPPL3Q8TCT6 385 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 PIK3R5Q8WYR1 880 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 TIFAQ96CG3 184 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 CHP1Q99653 195 aa12.64□□□□□ -0.39
POLR1B-205ENST00000424062 RTP3Q9BQQ7 232 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms