RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 PNMA8AQ86V59 439 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 GOLGA5Q8TBA6 731 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 JPH3Q8WXH2 748 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 FERMT2Q96AC1 680 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 MRFAP1L1Q96HT8 127 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 CPPED1Q9BRF8 314 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 SLKQ9H2G2 1235 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 TAOK3Q9H2K8 898 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SMYD2Q9NRG4 433 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 HOMER2Q9NSB8 354 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 OGFRQ9NZT2 677 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 EPS15L1Q9UBC2 864 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 DKK3Q9UBP4 350 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 CNPY2Q9Y2B0 182 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SSX2IPQ9Y2D8 614 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 KDRP35968 1356 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 GPRASP1Q5JY77 1395 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 PHLDB1Q86UU1 1377 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 FAM170AA1A519 330 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 TOR1BO14657 336 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 KLHL41O60662 606 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 GAS7O60861 476 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 ERLIN1O75477 346 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 STAM2O75886 525 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SCGB1D2O95969 90 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 JMJD7P0C870 316 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 XRCC6P12956 609 aaKnown RBP eCLIP3.19□□□□□ -1.9
PMS1-209ENST00000424059 SLC9A1P19634 815 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 TNFAIP3P21580 790 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 HSPA4P34932 840 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 BMPR1AP36894 532 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SKIV2L2P42285 1042 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 GZMKP49863 264 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 MXI1P50539 228 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 EXOSC10Q01780 885 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 ZBTB17Q13105 803 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SP140Q13342 867 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 ZNF460Q14592 562 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 RBBP5Q15291 538 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 CCDC152Q4G0S7 254 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 BOLA3Q53S33 107 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 STRIP1Q5VSL9 837 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 HIBCHQ6NVY1 386 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 ARMC6Q6NXE6 501 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 DRICH1Q6PGQ1 229 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 GPRIN1Q7Z2K8 1008 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 ARMC9Q7Z3E5 817 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 ARHGEF19Q8IW93 802 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 LINC00469Q8N7U9 141 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 ATP11CQ8NB49 1132 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 PIK3C3Q8NEB9 887 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 ANKRD20A12PQ8NF67 263 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 LRRC45Q96CN5 670 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 RBM18Q96H35 190 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 C8orf76Q96K31 380 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 COQ10AQ96MF6 247 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 TSGA13Q96PP4 275 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 MLST8Q9BVC4 326 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 AP1M1Q9BXS5 423 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 FAM126AQ9BYI3 521 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 DBNDD1Q9H9R9 158 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 CYP4F11Q9HBI6 524 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 DDX21Q9NR30 783 aaKnown RBP eCLIP3.19□□□□□ -1.9
PMS1-209ENST00000424059 MRGBPQ9NV56 204 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 TMEM260Q9NX78 707 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SAGE1Q9NXZ1 904 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 ZNHIT2Q9UHR6 403 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 EIF2B4Q9UI10 523 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 PNMA8BQ9ULN7 279 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 LUC7L2Q9Y383 392 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 MAGED1Q9Y5V3 778 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 SOS1Q07889 1333 aaPredicted RBP3.18□□□□□ -1.9
PMS1-209ENST00000424059 GOLGA6L10A0A0M3HER8 536 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 ZAR1LA6NP61 321 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 PRR5-ARHGAP8B1AHC4 643 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 AKR1B15C9JRZ8 316 aaPredicted RBP3.18□□□□□ -1.9
PMS1-209ENST00000424059 ZNF254O75437 659 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 SCAF4O95104 1147 aaKnown RBP3.18□□□□□ -1.9
PMS1-209ENST00000424059 F2P00734 622 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 SLC4A1P02730 911 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 PFKMP08237 780 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 SPATA31D3P0C874 917 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 TRIM21P19474 475 aaKnown RBP3.18□□□□□ -1.9
PMS1-209ENST00000424059 POLD2P49005 469 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 PEX5P50542 639 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 USP14P54578 494 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 PHC1P78364 1004 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 KRT83P78385 493 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 CYP4A11Q02928 519 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 ITIH3Q06033 890 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 CCDC173Q0VFZ6 552 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 MPP3Q13368 585 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 SQSTM1Q13501 440 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 TNIP1Q15025 636 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 PUM3Q15397 648 aaKnown RBP3.18□□□□□ -1.9
PMS1-209ENST00000424059 KSR2Q6VAB6 950 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 SPATA31D4Q6ZUB0 917 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 PLXDC1Q8IUK5 500 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 CPXCR1Q8N123 301 aa3.18□□□□□ -1.9
PMS1-209ENST00000424059 LRRC43Q8N309 656 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms