RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 FGFBP2Q9BYJ0 223 aa19.93■□□□□ 0.78
SREBF1-206ENST00000423161 ZSCAN16Q9H4T2 348 aaPredicted RBP19.93■□□□□ 0.78
SREBF1-206ENST00000423161 PANK4Q9NVE7 773 aa19.93■□□□□ 0.78
SREBF1-206ENST00000423161 ABI2Q9NYB9 513 aaPredicted RBP19.93■□□□□ 0.78
SREBF1-206ENST00000423161 RBAKQ9NYW8 714 aaPredicted RBP19.93■□□□□ 0.78
SREBF1-206ENST00000423161 DCHS1Q96JQ0 3298 aa19.93■□□□□ 0.78
SREBF1-206ENST00000423161 FRMD3A2A2Y4 597 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 STX6O43752 255 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 ITGB3P05106 788 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 CDC25CP30307 473 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 POLR2BP30876 1174 aaKnown RBP19.92■□□□□ 0.78
SREBF1-206ENST00000423161 CYP4F8P98187 520 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 TAF12Q16514 161 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 DCP1BQ8IZD4 617 aaKnown RBP19.92■□□□□ 0.78
SREBF1-206ENST00000423161 DCLK2Q8N568 766 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 PDILTQ8N807 584 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 GIPC2Q8TF65 315 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 NOC3LQ8WTT2 800 aaKnown RBP19.92■□□□□ 0.78
SREBF1-206ENST00000423161 NELL1Q92832 810 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 IER2Q9BTL4 223 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 LMAN1LQ9HAT1 526 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 AGAP1Q9UPQ3 857 aa19.92■□□□□ 0.78
SREBF1-206ENST00000423161 GOLGA8IPA6NC78 632 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 GOLGA8JA6NMD2 632 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 SLC38A8A6NNN8 435 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 K7ELQ4 463 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-206ENST00000423161 HAPLN1P10915 354 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-206ENST00000423161 NASPP49321 788 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-206ENST00000423161 KPNA1P52294 538 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-206ENST00000423161 MLLT6P55198 1093 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-206ENST00000423161 FOXK2Q01167 660 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 STK38Q15208 465 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 C1orf127Q8N9H9 656 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 CACTINQ8WUQ7 758 aaKnown RBP19.91■□□□□ 0.78
SREBF1-206ENST00000423161 MSANTD3Q96H12 275 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 CBWD1Q9BRT8 395 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 TASP1Q9H6P5 420 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 C8orf33Q9H7E9 229 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-206ENST00000423161 IL21Q9HBE4 155 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 OBP2AQ9NY56 170 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 PCDHB5Q9Y5E4 795 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 CEP250Q9BV73 2442 aa19.91■□□□□ 0.78
SREBF1-206ENST00000423161 LILRB5O75023 590 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 PRPF6O94906 941 aaKnown RBP19.9■□□□□ 0.78
SREBF1-206ENST00000423161 PRAMEF12O95522 483 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 SOX9P48436 509 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 TSPY1Q01534 308 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 BFSP1Q12934 665 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 ARHGAP29Q52LW3 1261 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 C1orf228Q6PIY5 440 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 CCDC65Q8IXS2 484 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 ZFYVE19Q96K21 471 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 FAM84AQ96KN4 292 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 LRRC3BQ96PB8 259 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 FAM126AQ9BYI3 521 aaPredicted RBP19.9■□□□□ 0.78
SREBF1-206ENST00000423161 PCIF1Q9H4Z3 704 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 TMEM206Q9H813 350 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 TMLHEQ9NVH6 421 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 NCDNQ9UBB6 729 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 L1RE1Q9UN81 338 aa19.9■□□□□ 0.78
SREBF1-206ENST00000423161 EXTL3O43909 919 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 HUS1O60921 280 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 CHRNB1P11230 501 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 WEE1P30291 646 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 CCR3P51677 355 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 PPP2R5DQ14738 602 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 GREB1Q4ZG55 1949 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 ERMP1Q7Z2K6 904 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 PDCL2Q8N4E4 241 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 CSGALNACT2Q8N6G5 542 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 LRRC52Q8N7C0 313 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 LINC00301Q8NCQ3 95 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 BPIFB1Q8TDL5 484 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 BACH2Q9BYV9 841 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 ANAPC1Q9H1A4 1944 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 EPC1Q9H2F5 836 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 PDE11AQ9HCR9 933 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 ITGA11Q9UKX5 1188 aa19.89■□□□□ 0.77
SREBF1-206ENST00000423161 SMG5Q9UPR3 1016 aaKnown RBP19.89■□□□□ 0.77
SREBF1-206ENST00000423161 SPECC1L-ADORA2AF8WAN1 911 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 KRT19P08727 400 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 TMEM191BP0C7N4 346 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 TDGF1P13385 188 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 LRRC32Q14392 662 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 NFE2Q16621 373 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-206ENST00000423161 MAMSTRQ6ZN01 415 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 GPD1LQ8N335 351 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 TTC8Q8TAM2 541 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 RMDN1Q96DB5 314 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 PI4K2AQ9BTU6 479 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 MTMR12Q9C0I1 747 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 SMG9Q9H0W8 520 aaKnown RBP19.88■□□□□ 0.77
SREBF1-206ENST00000423161 DDX43Q9NXZ2 648 aaKnown RBP19.88■□□□□ 0.77
SREBF1-206ENST00000423161 GTSE1Q9NYZ3 720 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 CACNA1AO00555 2505 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 PTPRDP23468 1912 aa19.88■□□□□ 0.77
SREBF1-206ENST00000423161 ATG2BQ96BY7 2078 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 RALGAPA1Q6GYQ0 2036 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 MYBPHLA2RUH7 354 aa19.87■□□□□ 0.77
SREBF1-206ENST00000423161 SPTLC2O15270 562 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms