RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 OR6B3Q8NGW1 331 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 FAM81BQ96LP2 452 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 KLHL5Q96PQ7 755 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 ACBD6Q9BR61 282 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 XPO4Q9C0E2 1151 aaKnown RBP18.15■□□□□ 0.5
COL7A1-202ENST00000422991 NSUN3Q9H649 340 aaKnown RBP18.15■□□□□ 0.5
COL7A1-202ENST00000422991 UBE2TQ9NPD8 197 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-202ENST00000422991 CISHQ9NSE2 258 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 HMGXB4Q9UGU5 601 aa18.15■□□□□ 0.5
COL7A1-202ENST00000422991 AJAP1Q9UKB5 411 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-202ENST00000422991 BARX2Q9UMQ3 279 aaPredicted RBP18.15■□□□□ 0.5
COL7A1-202ENST00000422991 AP5Z1O43299 807 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 CBFA2T2O43439 604 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 CILPO75339 1184 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 NOL4O94818 638 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 ADH1AP07327 375 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 ACO1P21399 889 aaKnown RBP18.14■□□□□ 0.49
COL7A1-202ENST00000422991 RFX1P22670 979 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 ACAT1P24752 427 aaKnown RBP18.14■□□□□ 0.49
COL7A1-202ENST00000422991 LMO2P25791 158 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 OR1D2P34982 312 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 PBX1P40424 430 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 NDST1P52848 882 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 ROR1Q01973 937 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 PTPN21Q16825 1174 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 IQCEQ6IPM2 695 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 ENOSF1Q7L5Y1 443 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 UNC93AQ86WB7 457 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 GLYCTKQ8IVS8 523 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 JAKMIP2Q96AA8 810 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 TMEM209Q96SK2 561 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 SYT15Q9BQS2 421 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 ZCWPW1Q9H0M4 648 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 FAM207AQ9NSI2 230 aaPredicted RBP18.14■□□□□ 0.49
COL7A1-202ENST00000422991 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
COL7A1-202ENST00000422991 PTPRDP23468 1912 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 A8MXQ7 604 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 EPHB6O15197 1021 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 CLASP2O75122 1294 aaKnown RBP18.13■□□□□ 0.49
COL7A1-202ENST00000422991 TPM3P06753 285 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 OR4Q2P0C623 313 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 UCHL3P15374 230 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 MFAP3P55082 362 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 TSPY1Q01534 308 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 RAB33AQ14088 237 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 DUSP6Q16828 381 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 TCEAL5Q5H9L2 206 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 INTS6LQ5JSJ4 861 aaKnown RBP18.13■□□□□ 0.49
COL7A1-202ENST00000422991 WHAMMQ8TF30 809 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 PPP2R3CQ969Q6 453 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 PCMTD1Q96MG8 357 aaPredicted RBP18.13■□□□□ 0.49
COL7A1-202ENST00000422991 TWNKQ96RR1 684 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 PKMYT1Q99640 499 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 NAA15Q9BXJ9 866 aaKnown RBP18.13■□□□□ 0.49
COL7A1-202ENST00000422991 DPEP3Q9H4B8 488 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 TLE6Q9H808 572 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 DNAJC12Q9UKB3 198 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 CDH9Q9ULB4 789 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 DAAM1Q9Y4D1 1078 aa18.13■□□□□ 0.49
COL7A1-202ENST00000422991 MTCL1Q9Y4B5 1905 aaKnown RBP18.12■□□□□ 0.49
COL7A1-202ENST00000422991 WDR27A2RRH5 827 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 PDGFRBP09619 1106 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 CPB1P15086 417 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 KLRC2P26717 231 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 NRIP1P48552 1158 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 PSMC1P62191 440 aaKnown RBP18.12■□□□□ 0.49
COL7A1-202ENST00000422991 ORC1Q13415 861 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 CCDC142Q17RM4 750 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 B3GALNT2Q8NCR0 500 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 NEK11Q8NG66 645 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 PPM1EQ8WY54 764 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 SHC3Q92529 594 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 CDCA3Q99618 268 aaPredicted RBP18.12■□□□□ 0.49
COL7A1-202ENST00000422991 NT5C1AQ9BXI3 368 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 ELOVL4Q9GZR5 314 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 CRTAC1Q9NQ79 661 aa18.12■□□□□ 0.49
COL7A1-202ENST00000422991 PER2O15055 1255 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 ATP2C2O75185 946 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 ABLIM3O94929 683 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 C1RP00736 705 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 CLCN4P51793 760 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 RAD23BP54727 409 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 ARPP19P56211 112 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 PLCB2Q00722 1185 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 HYAL1Q12794 435 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 GPR17Q13304 367 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 CCDC85BQ15834 202 aaPredicted RBP18.11■□□□□ 0.49
COL7A1-202ENST00000422991 ARHGAP44Q17R89 818 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 SLC39A12Q504Y0 691 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 TPGS2Q68CL5 300 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 SMYD5Q6GMV2 418 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 RBM23Q86U06 439 aaKnown RBP18.11■□□□□ 0.49
COL7A1-202ENST00000422991 LRRTM3Q86VH5 581 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 PPFIBP1Q86W92 1011 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 DCP1BQ8IZD4 617 aaKnown RBP18.11■□□□□ 0.49
COL7A1-202ENST00000422991 SLC22A17Q8WUG5 538 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 TNIP3Q96KP6 325 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 CNTN6Q9UQ52 1028 aa18.11■□□□□ 0.49
COL7A1-202ENST00000422991 PCDHB4Q9Y5E5 795 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms