RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 MGAT5Q09328 741 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 DYNC1I2Q13409 638 aaKnown RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 GRIK5Q16478 980 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 PDK4Q16654 411 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 EPC2Q52LR7 807 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 CGB2Q6NT52 195 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 ECHDC2Q86YB7 292 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 APOBEC3FQ8IUX4 373 aaKnown RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 PGBD3Q8N328 593 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 ARHGAP18Q8N392 663 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 CCDC89Q8N998 374 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 LMO3Q8TAP4 145 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 ZNF564Q8TBZ8 553 aaPredicted RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 PSPC1Q8WXF1 523 aaKnown RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 DHX38Q92620 1227 aaKnown RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 MKL1Q969V6 931 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 UTP4Q969X6 686 aaKnown RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 LENG9Q96B70 501 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 ZBED3Q96IU2 234 aaPredicted RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 RMDN2Q96LZ7 410 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 CFAP57Q96MR6 1250 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 LRRC37BQ96QE4 947 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 FIZ1Q96SL8 496 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 TSC22D3Q99576 134 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 TIPINQ9BVW5 301 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 STRA6Q9BX79 667 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 PITPNM3Q9BZ71 974 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 UBA5Q9GZZ9 404 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 CCDC113Q9H0I3 377 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 CPVLQ9H3G5 476 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 TMEM206Q9H813 350 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 DNAJC18Q9H819 358 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 GBA2Q9HCG7 927 aaPredicted RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 VAT1LQ9HCJ6 419 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 AGPAT3Q9NRZ7 376 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 NINJ2Q9NZG7 142 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 TMOD4Q9NZQ9 345 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 DNAJB4Q9UDY4 337 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 SLC24A2Q9UI40 661 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 SERPINA10Q9UK55 444 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 ZNF646O15015 1829 aaPredicted RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 CNTNAP1P78357 1384 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 ATRNL1Q5VV63 1379 aa7.42□□□□□ -1.22
TVP23C-202ENST00000419890 ZNFX1Q9P2E3 1918 aaKnown RBP7.42□□□□□ -1.22
TVP23C-202ENST00000419890 NPHP3-ACAD11A0A0J9YXS1 232 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 SMIM23A6NLE4 172 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 A8MXQ7 604 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 PIK3CDO00329 1044 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 TP73O15350 636 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 PSTPIP1O43586 416 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 SPOPO43791 374 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 EDF1O60869 148 aaKnown RBP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 FTLP02792 175 aaPredicted RBP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 TSHRP16473 764 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 MARK3P27448 753 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ECE1P42892 770 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 CTCFP49711 727 aaPredicted RBP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 PAPOLAP51003 745 aaKnown RBP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 RAB27AP51159 221 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 CLCN2P51788 898 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 RAD23BP54727 409 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 PABPC4Q13310 644 aaKnown RBP eCLIP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 PPP2R5CQ13362 524 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ZNF211Q13398 564 aaPredicted RBP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 PRKG1Q13976 671 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 DOC2BQ14184 412 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 LONRF1Q17RB8 773 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 CLEC16AQ2KHT3 1053 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 EFHC2Q5JST6 749 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 GNASQ5JWF2 1037 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 FYB2Q5VWT5 728 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ANO7Q6IWH7 933 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 CYP4F22Q6NT55 531 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 RINT1Q6NUQ1 792 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 GJB7Q6PEY0 223 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 DRICH1Q6PGQ1 229 aaPredicted RBP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 MTHFD1LQ6UB35 978 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 C1orf186Q6ZWK4 172 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ENOSF1Q7L5Y1 443 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ZNF720Q7Z2F6 126 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ANKS1BQ7Z6G8 1248 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 SDCCAG8Q86SQ7 713 aaPredicted RBP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 SAPCD2Q86UD0 394 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 TRABD2AQ86V40 505 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 VSIG1Q86XK7 387 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ZNF677Q86XU0 584 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 FAM71AQ8IYT1 594 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ZDHHC14Q8IZN3 488 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ARHGAP24Q8N264 748 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ZCCHC9Q8N567 271 aaKnown RBP7.41□□□□□ -1.22
TVP23C-202ENST00000419890 FAM13CQ8NE31 585 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 ATL2Q8NHH9 583 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 DENND1AQ8TEH3 1009 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 C10orf82Q8WW14 230 aa7.41□□□□□ -1.22
TVP23C-202ENST00000419890 DNAJC9Q8WXX5 260 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms