RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MCPH1Q8NEM0 835 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 SNX21Q969T3 373 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 MRPL38Q96DV4 380 aaKnown RBP7.65□□□□□ -1.18
HMGN1-205ENST00000419378 INTS4Q96HW7 963 aaKnown RBP7.65□□□□□ -1.18
HMGN1-205ENST00000419378 MYRFLQ96LU7 910 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 MMTAG2Q9BU76 263 aaKnown RBP7.65□□□□□ -1.18
HMGN1-205ENST00000419378 TRIM55Q9BYV6 548 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 TMEM117Q9H0C3 514 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 POLR3FQ9H1D9 316 aaPredicted RBP7.65□□□□□ -1.18
HMGN1-205ENST00000419378 SEMA6CQ9H3T2 930 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 GPRC5CQ9NQ84 441 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 DDX19AQ9NUU7 478 aaKnown RBP7.65□□□□□ -1.18
HMGN1-205ENST00000419378 DACT1Q9NYF0 836 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 ACTR10Q9NZ32 417 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 THEGQ9P2T0 379 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 PCOLCE2Q9UKZ9 415 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 VWA3AA6NCI4 1184 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 FAM86C2PA6NEL3 165 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 INO80B-WBP1J3KQ70 363 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 GRM6O15303 877 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 TSPAN1O60635 241 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 ERLIN2O94905 339 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 EOMESO95936 686 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 CST3P01034 146 aaPredicted RBP7.64□□□□□ -1.19
HMGN1-205ENST00000419378 CYP11B2P19099 503 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 SYT1P21579 422 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 MAP4P27816 1152 aaKnown RBP7.64□□□□□ -1.19
HMGN1-205ENST00000419378 CDC25AP30304 524 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 POLR2BP30876 1174 aaKnown RBP7.64□□□□□ -1.19
HMGN1-205ENST00000419378 HOXA11P31270 313 aaPredicted RBP7.64□□□□□ -1.19
HMGN1-205ENST00000419378 RAB27AP51159 221 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 MBTD1Q05BQ5 628 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 POU5F1BQ06416 359 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 RAB33AQ14088 237 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 UVSSAQ2YD98 709 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 TIGD5Q53EQ6 642 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 PRAMEF13Q5VWM6 474 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 ARL6IP4Q66PJ3 421 aaKnown RBP7.64□□□□□ -1.19
HMGN1-205ENST00000419378 MAEAQ7L5Y9 396 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 C19orf47Q8N9M1 422 aaKnown RBP7.64□□□□□ -1.19
HMGN1-205ENST00000419378 P2RX5Q93086 422 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 CASD1Q96PB1 797 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 YIPF2Q9BWQ6 316 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 NFKBIZQ9BYH8 718 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 LMAN2LQ9H0V9 348 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 BHMT2Q9H2M3 363 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 CWH43Q9H720 699 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 TYW1Q9NV66 732 aaKnown RBP7.64□□□□□ -1.19
HMGN1-205ENST00000419378 MYO7AQ13402 2215 aa7.64□□□□□ -1.19
HMGN1-205ENST00000419378 A0A1W2PQH9 124 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 LRRIQ4A6NIV6 560 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 E9PMD0 336 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 TNFRSF10CO14798 259 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 B4GALT5O43286 388 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 ZNF623O75123 536 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 CSPG5O95196 566 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 EYA4O95677 639 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 BMP15O95972 392 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 ITGB1P05556 798 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 LAG3P18627 525 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 DNAJB1P25685 340 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 RESTQ13127 1097 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 PCBP1Q15365 356 aaKnown RBP eCLIP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 ZRSR1Q15695 479 aaKnown RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 LONRF3Q496Y0 759 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 UBXN11Q5T124 520 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 SPOUT1Q5T280 376 aaKnown RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 CDCA2Q69YH5 1023 aaPredicted RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 LRRC55Q6ZSA7 311 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 ARMCX6Q7L4S7 300 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 KCNK18Q7Z418 384 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 HSCBQ8IWL3 235 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 FAM20CQ8IXL6 584 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 PHACTR4Q8IZ21 702 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 TAB3Q8N5C8 712 aaPredicted RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 COLGALT1Q8NBJ5 622 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 ATXN2LQ8WWM7 1075 aaKnown RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 EZH1Q92800 747 aaPredicted RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 LPPQ93052 612 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 CCDC51Q96ER9 411 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 MRPL9Q9BYD2 267 aaKnown RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 FOXQ1Q9C009 403 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 OSBPL2Q9H1P3 480 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 NSUN3Q9H649 340 aaKnown RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 ALG13Q9NP73 1137 aaKnown RBP7.63□□□□□ -1.19
HMGN1-205ENST00000419378 COG5Q9UP83 839 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 PLAGL2Q9UPG8 496 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 DNM3Q9UQ16 869 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 MTMR6Q9Y217 621 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 PCDHB2Q9Y5E7 798 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 PLXNA4Q9HCM2 1894 aa7.63□□□□□ -1.19
HMGN1-205ENST00000419378 C5orf42Q9H799 3197 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 CNTNAP2Q9UHC6 1331 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 FGF18O76093 207 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 ARF4P18085 180 aaPredicted RBP7.62□□□□□ -1.19
HMGN1-205ENST00000419378 AXLP30530 894 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 PBX3P40426 434 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 NAMPTP43490 491 aa7.62□□□□□ -1.19
HMGN1-205ENST00000419378 MRPS5P82675 430 aaKnown RBP7.62□□□□□ -1.19
HMGN1-205ENST00000419378 TFF2Q03403 129 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms