RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 P4HA1P13674 534 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 CASP4P49662 377 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 VAMP7P51809 220 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 LRRC63Q05C16 580 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 SOWAHAQ2M3V2 549 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 ZNF699Q32M78 642 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 ZCWPW2Q504Y3 356 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 NPAS3Q8IXF0 933 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 FAM186BQ8IYM0 893 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 SMYD4Q8IYR2 804 aaPredicted RBP15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 FAM200AQ8TCP9 573 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 IMPG2Q9BZV3 1241 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 GZF1Q9H116 711 aaPredicted RBP15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 VRTNQ9H8Y1 702 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 ABCB6Q9NP58 842 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 ABI2Q9NYB9 513 aaPredicted RBP15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 CEP72Q9P209 647 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 CDH9Q9ULB4 789 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 DUSP12Q9UNI6 340 aa15.22■□□□□ 0.03
SLC13A3-205ENST00000417157 SCN1AP35498 2009 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 TMEM221A6NGB7 291 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 ANHXE9PGG2 379 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 M0R296 226 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 SLC16A3O15427 465 aaKnown RBP15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 STX10O60499 249 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 GADD45BO75293 160 aaPredicted RBP15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 AKAP3O75969 853 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 VNN2O95498 520 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 CST3P01034 146 aaPredicted RBP15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 EPB41P11171 864 aaKnown RBP15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 PRCPP42785 496 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 EPHA5P54756 1037 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 HTR4Q13639 388 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 NCOA4Q13772 614 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 TAF12Q16514 161 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 ZNF667Q5HYK9 610 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 TDRD10Q5VZ19 366 aaKnown RBP15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 C4orf50Q6ZRC1 276 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 LIMS2Q7Z4I7 341 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 BMP8AQ7Z5Y6 402 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 ITFG1Q8TB96 612 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 ZNF516Q92618 1163 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 TAF4BQ92750 862 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 PSMG2Q969U7 264 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 FUBP3Q96I24 572 aaKnown RBP eCLIP15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 GPR88Q9GZN0 384 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 SNX25Q9H3E2 840 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 SLC27A5Q9Y2P5 690 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 HCN4Q9Y3Q4 1203 aa15.21■□□□□ 0.03
SLC13A3-205ENST00000417157 C4BPAP04003 597 aaKnown RBP15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 HAPLN1P10915 354 aaPredicted RBP15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 MYL4P12829 197 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 TRIM21P19474 475 aaKnown RBP15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 MYL6P60660 151 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 RPL10AP62906 217 aaKnown RBP15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 FKBP3Q00688 224 aaKnown RBP15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 SLC5A9Q2M3M2 681 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 SGSM1Q2NKQ1 1148 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 ZACNQ401N2 412 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 PRSS36Q5K4E3 855 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 SPATA2LQ8IUW3 424 aaPredicted RBP15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 SUGP1Q8IWZ8 645 aaKnown RBP15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 ADSSL1Q8N142 457 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 CCDC150Q8NCX0 1101 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 PLEKHO2Q8TD55 490 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 KBTBD7Q8WVZ9 684 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 ING5Q8WYH8 240 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 DHTKD1Q96HY7 919 aaPredicted RBP15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 SYT15Q9BQS2 421 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 CRISPLD1Q9H336 500 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 NUMBLQ9Y6R0 609 aa15.2■□□□□ 0.02
SLC13A3-205ENST00000417157 SRFP11831 508 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 ACAT1P24752 427 aaKnown RBP15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 GTF2H1P32780 548 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 PIK3CAP42336 1068 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 DLG4P78352 724 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 SV2AQ7L0J3 742 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 LRRTM3Q86VH5 581 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 OSTM1Q86WC4 334 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 TRIML1Q8N9V2 468 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 OR6B3Q8NGW1 331 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 ERCC4Q92889 916 aaPredicted RBP15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 PBXIP1Q96AQ6 731 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 XYLT2Q9H1B5 865 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 DNAJC25Q9H1X3 360 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 NXF1Q9UBU9 619 aaKnown RBP15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 ZMYM5Q9UJ78 669 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 MAN1B1Q9UKM7 699 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 FBXL21Q9UKT6 434 aa15.19■□□□□ 0.02
SLC13A3-205ENST00000417157 BICDL2A1A5D9 508 aa15.18■□□□□ 0.02
SLC13A3-205ENST00000417157 CSH1P0DML2 217 aa15.18■□□□□ 0.02
SLC13A3-205ENST00000417157 CSH2P0DML3 217 aa15.18■□□□□ 0.02
SLC13A3-205ENST00000417157 CEBPBP17676 345 aa15.18■□□□□ 0.02
SLC13A3-205ENST00000417157 ATF6P18850 670 aa15.18■□□□□ 0.02
SLC13A3-205ENST00000417157 CCNE1P24864 410 aa15.18■□□□□ 0.02
SLC13A3-205ENST00000417157 CDC25CP30307 473 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms