RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 DNAJB7Q7Z6W7 309 aaPredicted RBP16.79■□□□□ 0.28
ITGB1-204ENST00000417122 ITIH5Q86UX2 942 aa16.79■□□□□ 0.28
ITGB1-204ENST00000417122 TMC8Q8IU68 726 aa16.79■□□□□ 0.28
ITGB1-204ENST00000417122 SPATA18Q8TC71 538 aa16.79■□□□□ 0.28
ITGB1-204ENST00000417122 PSMG2Q969U7 264 aa16.79■□□□□ 0.28
ITGB1-204ENST00000417122 CCDC47Q96A33 483 aaKnown RBP16.79■□□□□ 0.28
ITGB1-204ENST00000417122 HPDLQ96IR7 371 aa16.79■□□□□ 0.28
ITGB1-204ENST00000417122 ACBD6Q9BR61 282 aa16.79■□□□□ 0.28
ITGB1-204ENST00000417122 LRRC3Q9BY71 257 aa16.79■□□□□ 0.28
ITGB1-204ENST00000417122 ABI2Q9NYB9 513 aaPredicted RBP16.79■□□□□ 0.28
ITGB1-204ENST00000417122 LHX1P48742 406 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 NUBP1P53384 320 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 TEAD2Q15562 447 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 SOWAHAQ2M3V2 549 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 FAM78AQ5JUQ0 283 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 DPH6Q7L8W6 267 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 OSTM1Q86WC4 334 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 ADGRF2Q8IZF7 708 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 SHKBP1Q8TBC3 707 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 FAM200AQ8TCP9 573 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 ELSPBP1Q96BH3 223 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 ZSWIM3Q96MP5 696 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 LPIN3Q9BQK8 851 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 PLA2G2FQ9BZM2 168 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 KCTD10Q9H3F6 313 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 ARHGEF3Q9NR81 526 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 TMLHEQ9NVH6 421 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 PCDHB5Q9Y5E4 795 aa16.78■□□□□ 0.28
ITGB1-204ENST00000417122 A0A1W2PRU2 124 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 STK25O00506 426 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 PDXKO00764 312 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 GABRDO14764 452 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 RHOBTB3O94955 611 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 KIF20AO95235 890 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 CST3P01034 146 aaPredicted RBP16.77■□□□□ 0.28
ITGB1-204ENST00000417122 HAPLN1P10915 354 aaPredicted RBP16.77■□□□□ 0.28
ITGB1-204ENST00000417122 ATF6P18850 670 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 AOC1P19801 751 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 RFX1P22670 979 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 FCARP24071 287 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 ACAT1P24752 427 aaKnown RBP16.77■□□□□ 0.28
ITGB1-204ENST00000417122 PTPN5P54829 565 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 NHLH1Q02575 133 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 VEPH1Q14D04 833 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 NFE2Q16621 373 aaPredicted RBP16.77■□□□□ 0.28
ITGB1-204ENST00000417122 INTS6LQ5JSJ4 861 aaKnown RBP16.77■□□□□ 0.28
ITGB1-204ENST00000417122 SLC9A9Q8IVB4 645 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 TMEM174Q8WUU8 243 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 ZNF516Q92618 1163 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 ASB16Q96NS5 453 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 GPR88Q9GZN0 384 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 GZF1Q9H116 711 aaPredicted RBP16.77■□□□□ 0.28
ITGB1-204ENST00000417122 ZFP14Q9HCL3 533 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 ZNF334Q9HCZ1 680 aaPredicted RBP16.77■□□□□ 0.28
ITGB1-204ENST00000417122 DMAC2Q9NW81 257 aa16.77■□□□□ 0.28
ITGB1-204ENST00000417122 GOLGA6L4A6NEF3 574 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 PI15O43692 258 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 FGF19O95750 216 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 PCSK1P29120 753 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 CASP4P49662 377 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 PFKPQ01813 784 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 TCF15Q12870 199 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 LIMS2Q7Z4I7 341 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 PARD3BQ8TEW8 1205 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 GIPC2Q8TF65 315 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 SMARCD2Q92925 531 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 CCDC34Q96HJ3 373 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 PI4K2AQ9BTU6 479 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 SLITRK6Q9H5Y7 841 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 TBC1D17Q9HA65 648 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 GTF3C4Q9UKN8 822 aa16.76■□□□□ 0.27
ITGB1-204ENST00000417122 GALR2O43603 387 aaPredicted RBP16.75■□□□□ 0.27
ITGB1-204ENST00000417122 HCRTO43612 131 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 CALUO43852 315 aaPredicted RBP16.75■□□□□ 0.27
ITGB1-204ENST00000417122 NR3C1P04150 777 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 GABRR2P28476 465 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 TRPC3Q13507 836 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 SNW1Q13573 536 aaKnown RBP16.75■□□□□ 0.27
ITGB1-204ENST00000417122 KCNB1Q14721 858 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 TAF12Q16514 161 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 PHLDB3Q6NSJ2 640 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 GAREM2Q75VX8 874 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 ZSCAN18Q8TBC5 510 aaPredicted RBP16.75■□□□□ 0.27
ITGB1-204ENST00000417122 PLEKHO2Q8TD55 490 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 KBTBD7Q8WVZ9 684 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 SHDQ96IW2 340 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 MMS19Q96T76 1030 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 PKMYT1Q99640 499 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 ATXN3LQ9H3M9 355 aa16.75■□□□□ 0.27
ITGB1-204ENST00000417122 MYBPHLA2RUH7 354 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 LRRIQ3A6PVS8 624 aaPredicted RBP16.74■□□□□ 0.27
ITGB1-204ENST00000417122 PHACTR2O75167 634 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 WARSP23381 471 aaKnown RBP16.74■□□□□ 0.27
ITGB1-204ENST00000417122 LMO2P25791 158 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 AP3M2P53677 418 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 STARD6P59095 220 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 WDR72Q3MJ13 1102 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 SLC44A4Q53GD3 710 aa16.74■□□□□ 0.27
ITGB1-204ENST00000417122 SPATA2LQ8IUW3 424 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms