RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 HUS1O60921 280 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 KRT19P08727 400 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 SLFN14P0C7P3 912 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 ATF6P18850 670 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 SNRPFP62306 86 aaKnown RBP19.23■□□□□ 0.67
CPNE1-210ENST00000416778 FZD5Q13467 585 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 DUOXA2Q1HG44 320 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 MGAT5BQ3V5L5 792 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 LMBRD2Q68DH5 695 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-210ENST00000416778 LIMS2Q7Z4I7 341 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 FRMD5Q7Z6J6 570 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 C1orf210Q8IVY1 113 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 TMEM86AQ8N2M4 240 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 RDH13Q8NBN7 331 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 SPPL2BQ8TCT7 592 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 RSPRY1Q96DX4 576 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 SEPT5Q99719 369 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-210ENST00000416778 LPIN3Q9BQK8 851 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 MTMR12Q9C0I1 747 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 BRD9Q9H8M2 597 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 IL21Q9HBE4 155 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 HEBP1Q9NRV9 189 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 AGPAT3Q9NRZ7 376 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 SERTAD1Q9UHV2 236 aa19.23■□□□□ 0.67
CPNE1-210ENST00000416778 PTPRZ1P23471 2315 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-210ENST00000416778 RIF1Q5UIP0 2472 aaKnown RBP19.22■□□□□ 0.67
CPNE1-210ENST00000416778 HEPACAM2A8MVW5 462 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 GABRDO14764 452 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 CLIC2O15247 247 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 GFRA3O60609 400 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 FGF19O95750 216 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 CMA1P23946 247 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 GDI1P31150 447 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 BFSP1Q12934 665 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 SOWAHAQ2M3V2 549 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 STXBP5Q5T5C0 1151 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 DPH6Q7L8W6 267 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 ASCL5Q7RTU5 278 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 OSTM1Q86WC4 334 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 GPIHBP1Q8IV16 184 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 ARID3BQ8IVW6 561 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-210ENST00000416778 NELFCDQ8IXH7 590 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 GRAMD1CQ8IYS0 662 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 ZNF687Q8N1G0 1237 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 TOP6BLQ8N6T0 577 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 GIPC2Q8TF65 315 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 DNASE1L2Q92874 299 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 IRF7Q92985 503 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 E2F7Q96AV8 911 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 CLDN23Q96B33 292 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 PAGE5Q96GU1 130 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 ANKRD36BP1Q96IX9 119 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 LRRC3BQ96PB8 259 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 PKMYT1Q99640 499 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 ATXN3LQ9H3M9 355 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 SLC39A2Q9NP94 309 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 LTB4R2Q9NPC1 389 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 DDX43Q9NXZ2 648 aaKnown RBP19.22■□□□□ 0.67
CPNE1-210ENST00000416778 PCDHB5Q9Y5E4 795 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 SNX9Q9Y5X1 595 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 NCANO14594 1321 aa19.22■□□□□ 0.67
CPNE1-210ENST00000416778 MYH15Q9Y2K3 1946 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-210ENST00000416778 KLRC4O43908 158 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 CST3P01034 146 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-210ENST00000416778 TMEM191BP0C7N4 346 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 GABRR2P28476 465 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 WEE1P30291 646 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 UBXN2BQ14CS0 331 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 BMT2Q1RMZ1 405 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 ZNF852Q6ZMS4 543 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 TPRG1Q6ZUI0 275 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 MAML2Q8IZL2 1156 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-210ENST00000416778 SPATA18Q8TC71 538 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 FAM200AQ8TCP9 573 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 DEPDC1BQ8WUY9 529 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 LEO1Q8WVC0 666 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-210ENST00000416778 HPDLQ96IR7 371 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 CHAMP1Q96JM3 812 aa19.21■□□□□ 0.67
CPNE1-210ENST00000416778 ABI2Q9NYB9 513 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-210ENST00000416778 ARNTLO00327 626 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 ACTN4O43707 911 aaKnown RBP19.2■□□□□ 0.66
CPNE1-210ENST00000416778 TNNC2P02585 160 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 HMGA1P17096 107 aaKnown RBP19.2■□□□□ 0.66
CPNE1-210ENST00000416778 LHX1P48742 406 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 TSPY1Q01534 308 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 MYO1EQ12965 1108 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 SNRNP35Q16560 246 aaKnown RBP19.2■□□□□ 0.66
CPNE1-210ENST00000416778 NFE2Q16621 373 aaPredicted RBP19.2■□□□□ 0.66
CPNE1-210ENST00000416778 KNOP1Q1ED39 458 aaKnown RBP19.2■□□□□ 0.66
CPNE1-210ENST00000416778 TRAPPC11Q7Z392 1133 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 TMEM150AQ86TG1 271 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 WDR49Q8IV35 697 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 C12orf56Q8IXR9 622 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 XXYLT1Q8NBI6 393 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 ZNF516Q92618 1163 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 PI4K2AQ9BTU6 479 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 SLC46A2Q9BY10 475 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 SLITRK6Q9H5Y7 841 aa19.2■□□□□ 0.66
CPNE1-210ENST00000416778 TASP1Q9H6P5 420 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms