RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 SUPT20HL2P0C7V6 817 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 FAM200BP0CF97 657 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 SPRP35270 261 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 OR1G1P47890 313 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 ALDH7A1P49419 539 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 ANXA11P50995 505 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 MAGOHP61326 146 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 PPIL2Q13356 520 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 SLC18A3Q16572 532 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 RARS2Q5T160 578 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 C15orf52Q6ZUT6 534 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 CDK5RAP1Q96SZ6 601 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 NMRK1Q9NWW6 199 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 PKP3Q9Y446 797 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 CCDC195A0A1B0GUA6 201 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 GTPBP10A4D1E9 387 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 GNL1P36915 607 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 NLRP11P59045 1033 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 AMPD2Q01433 879 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 ZNF211Q13398 564 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 NAPEPLDQ6IQ20 393 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 LRRC8BQ6P9F7 803 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 SHC4Q6S5L8 630 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 GAS2L3Q86XJ1 694 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 ELMO2Q96JJ3 720 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 ATP6V1G3Q96LB4 118 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 RNF208Q9H0X6 261 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 RIC8BQ9NVN3 520 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 FAM32AQ9Y421 112 aaKnown RBP8.84□□□□□ -0.99
CTNND1-206ENST00000415361 ADGRG1Q9Y653 693 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 MRC1P22897 1456 aa8.84□□□□□ -0.99
CTNND1-206ENST00000415361 FOXN1O15353 648 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ANXA9O76027 345 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ACOT2P49753 483 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 PLD1Q13393 1074 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 NCAPHQ15003 741 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 AARS2Q5JTZ9 985 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 DAGLBQ8NCG7 672 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 MYCBPQ99417 103 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 PRPF18Q99633 342 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 SPATS2LQ9NUQ6 558 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 KRT87PA6NCN2 255 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 KITP10721 976 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 KCNA4P22459 653 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 GTF2H1P32780 548 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ERVK-9P63128 1117 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ERVK-24P63145 666 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 TP53BP2Q13625 1128 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 TTLL9Q3SXZ7 439 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 RABGAP1LQ5R372 815 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 MOXD1Q6UVY6 613 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ZC3H18Q86VM9 953 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 RNF135Q8IUD6 432 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 RIBC1Q8N443 379 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 PAWRQ96IZ0 340 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 CLMNQ96JQ2 1002 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 EMILIN2Q9BXX0 1053 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.83□□□□□ -12e-7■■□□□ 14.4
CTNND1-206ENST00000415361 LTN1O94822 1766 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 CHD2O14647 1828 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 RPA1P27694 616 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 FDFT1P37268 417 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 SLC26A2P50443 739 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 CACNB2Q08289 660 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 NOGQ13253 232 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 GOLGA7BQ2TAP0 167 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 AP1ARQ63HQ0 302 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 PTRHD1Q6GMV3 140 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 LRRC8EQ6NSJ5 796 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 NFRKBQ6P4R8 1299 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 RGS9BPQ6ZS82 235 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ADSSL1Q8N142 457 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 UNC45AQ9H3U1 944 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ECT2Q9H8V3 914 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 INTUQ9ULD6 942 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ATRNO75882 1429 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 CCDC78A2IDD5 438 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 TMEM88BA6NKF7 163 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 MSH4O15457 936 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 POLBP06746 335 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ARP10275 920 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 VCLP18206 1134 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 KPNA1P52294 538 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 SNX31Q8N9S9 440 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ICA1LQ8NDH6 482 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 ZNF555Q8NEP9 628 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 VPS37AQ8NEZ2 397 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 CINPQ9BW66 212 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 NMRK2Q9NPI5 230 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 PXMP2Q9NR77 195 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 IL17RBQ9NRM6 502 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 PSMC3IPQ9P2W1 217 aaPredicted RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 WARS2Q9UGM6 360 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 SPACA6W5XKT8 324 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 MON2Q7Z3U7 1717 aa8.83□□□□□ -1
CTNND1-206ENST00000415361 RNASEH1O60930 286 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 CLASP2O75122 1294 aaKnown RBP8.83□□□□□ -1
CTNND1-206ENST00000415361 RHBDL3P58872 404 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms