RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 POLRMTO00411 1230 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 TERTO14746 1132 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 HGSO14964 777 aaPredicted RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 ARHGAP6O43182 974 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 FAM155BO75949 473 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 DHRS4L1P0CG22 281 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 ALDH9A1P49189 494 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 COPAP53621 1224 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 PSMC1P62191 440 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 SRSF11Q05519 484 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 SLC13A2Q13183 592 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 SLC12A1Q13621 1099 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 KCNAB1Q14722 419 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 ADRM1Q16186 407 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 RGL3Q3MIN7 710 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 FIGNQ5HY92 759 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 IZUMO3Q5VZ72 239 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 USP49Q70CQ1 688 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 AMIGO3Q86WK7 504 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 SLC15A4Q8N697 577 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 LSM14AQ8ND56 463 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 PANK1Q8TE04 598 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 ZBTB10Q96DT7 871 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 TACO1Q9BSH4 297 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 COLEC11Q9BWP8 271 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 EPC1Q9H2F5 836 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 ADAM7Q9H2U9 754 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 MLXIPQ9HAP2 919 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 HAUS2Q9NVX0 235 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 FRMD4BQ9Y2L6 1034 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 TAF6LQ9Y6J9 622 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 MGAMO43451 1857 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 ARAP2Q8WZ64 1704 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 MAST2Q6P0Q8 1798 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 ZC3H12DA2A288 527 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 MYO1FO00160 1098 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 TMCC2O75069 709 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 IL18RAPO95256 599 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 CYP17A1P05093 508 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 BCRP11274 1271 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 CPA1P15085 419 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 ELNP15502 786 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 STAT5BP51692 787 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 DDR1Q08345 913 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 SEPT2Q15019 361 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 P3H1Q32P28 736 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 MUM1L1Q5H9M0 696 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 RNF44Q7L0R7 432 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 CABP7Q86V35 215 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 CNTROBQ8N137 903 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 OR14C36Q8NHC7 312 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 WFDC12Q8WWY7 111 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 PHKBQ93100 1093 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 IQCDQ96DY2 449 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 ZC3H10Q96K80 434 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 LSM14BQ9BX40 385 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 STRA6Q9BX79 667 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 BRD8Q9H0E9 1235 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 TRIT1Q9H3H1 467 aaKnown RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 PLEKHA5Q9HAU0 1116 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 SLC6A20Q9NP91 592 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 WASH6PQ9NQA3 447 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 KIF17Q9P2E2 1029 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 SIK3Q9Y2K2 1263 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 IBTKQ9P2D0 1353 aaPredicted RBP2.9□□□□□ -1.95
MCF2-204ENST00000414978 A0A0G2JLW4 131 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 A6NLC8 198 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 AGAP14A8MT82 685 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 NRG2O14511 850 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 URI1O94763 535 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 ZNF205O95201 554 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 CELA2BP08218 269 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 MTHFD2P13995 350 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 YBX1P67809 324 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 DSC2Q02487 901 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 WASHC5Q12768 1159 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 FAM110CQ1W6H9 321 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 MPEG1Q2M385 716 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 BTBD16Q32M84 506 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 FAM133BQ5BKY9 247 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 PRRT3Q5FWE3 981 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 USP50Q70EL3 339 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 SPACA3Q8IXA5 215 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ARMC10Q8N2F6 343 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ZGPATQ8N5A5 531 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 PLEKHO2Q8TD55 490 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ASB11Q8WXH4 323 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ZUFSPQ96AP4 578 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 C16orf92Q96LL3 132 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ZMAT2Q96NC0 199 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 CNPPD1Q9BV87 410 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 CEP41Q9BYV8 373 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 DCP1AQ9NPI6 582 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 CNNM1Q9NRU3 951 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 HACL1Q9UJ83 578 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ISY1Q9ULR0 285 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 PCDHB6Q9Y5E3 794 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 PCDHB4Q9Y5E5 795 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 CENPJQ9HC77 1338 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 KIAA0391O15091 583 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms