RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 MRPL58Q14197 206 aaKnown RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 DDX53Q86TM3 631 aaKnown RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 UNC93AQ86WB7 457 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 LRRC8AQ8IWT6 810 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 C12orf29Q8N999 325 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 OLIG1Q8TAK6 271 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 EPS8L1Q8TE68 723 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 SLC20A1Q8WUM9 679 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 ZNF830Q96NB3 372 aaPredicted RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 TTPALQ9BTX7 342 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 FAM124BQ9H5Z6 455 aaPredicted RBP27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 HAUS4Q9H6D7 363 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 CHST7Q9NS84 486 aa27.65■■■□□ 2.02
RHBDD3-203ENST00000413137 TSC2P49815 1807 aa27.64■■■□□ 2.02
RHBDD3-203ENST00000413137 OAZ2O95190 189 aa27.64■■■□□ 2.01
RHBDD3-203ENST00000413137 SOD2P04179 222 aa27.64■■■□□ 2.01
RHBDD3-203ENST00000413137 CYP11B1P15538 503 aa27.64■■■□□ 2.01
RHBDD3-203ENST00000413137 SSTR3P32745 418 aaPredicted RBP27.64■■■□□ 2.01
RHBDD3-203ENST00000413137 PRSS55Q6UWB4 352 aaPredicted RBP27.64■■■□□ 2.01
RHBDD3-203ENST00000413137 HEXIM2Q96MH2 286 aaKnown RBP27.64■■■□□ 2.01
RHBDD3-203ENST00000413137 ALG13Q9NP73 1137 aaKnown RBP27.64■■■□□ 2.01
RHBDD3-203ENST00000413137 BRD2P25440 801 aaKnown RBP27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 PRKCIP41743 596 aa27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 PLCB3Q01970 1234 aa27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 PTK2Q05397 1052 aa27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 KLHL30Q0D2K2 578 aa27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 USP41Q3LFD5 358 aa27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 ZNF571Q7Z3V5 609 aaPredicted RBP27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 TTC39CQ8N584 583 aa27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 DDX1Q92499 740 aaKnown RBP27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 CERS4Q9HA82 394 aa27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 CRTAC1Q9NQ79 661 aa27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 NOCTQ9UK39 431 aaKnown RBP27.63■■■□□ 2.01
RHBDD3-203ENST00000413137 CFHP08603 1231 aa27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 FECHP22830 423 aa27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 GNA15P30679 374 aa27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 TSR1Q2NL82 804 aaKnown RBP27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 TAF3Q5VWG9 929 aa27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 RSPO2Q6UXX9 243 aaPredicted RBP27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 VPS52Q8N1B4 723 aa27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 CRYBG2Q8N1P7 616 aa27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 AUTS2Q8WXX7 1259 aa27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 HERC2P3Q9BVR0 1158 aa27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 ZNHIT6Q9NWK9 470 aaKnown RBP27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 PUF60Q9UHX1 559 aaKnown RBP27.62■■■□□ 2.01
RHBDD3-203ENST00000413137 ARHGEF37A1IGU5 675 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 CARNS1A5YM72 827 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 C2CD2LO14523 706 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 SERPING1P05155 500 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 PAEPP09466 180 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 CHRNB2P17787 502 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 DNAJB1P25685 340 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 LRRTM3Q86VH5 581 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 LNX1Q8TBB1 728 aaPredicted RBP27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 SPATA18Q8TC71 538 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 RIN2Q8WYP3 895 aaPredicted RBP27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 SYT15Q9BQS2 421 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 SYT11Q9BT88 431 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 PLVAPQ9BX97 442 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 KCNF1Q9H3M0 494 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 MSRAQ9UJ68 235 aa27.61■■■□□ 2.01
RHBDD3-203ENST00000413137 MYBPHLA2RUH7 354 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 C5orf67F2Z3F1 127 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 OR4Q2P0C623 313 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 CD19P15391 556 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 PTPN1P18031 435 aaKnown RBP27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 KRT17Q04695 432 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 B3GALNT2Q8NCR0 500 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 TGS1Q96RS0 853 aaKnown RBP27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 BAG1Q99933 345 aaPredicted RBP27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 ACBD6Q9BR61 282 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 FAM49BQ9NUQ9 324 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 RWDD3Q9Y3V2 267 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 NLRC5Q86WI3 1866 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 FAM170AA1A519 330 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 THAP12O43422 761 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 TBC1D4O60343 1298 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 MMEP08473 750 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 RPL17P18621 184 aaKnown RBP27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 DNAJB2P25686 324 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 EIF4A3P38919 411 aaKnown RBP27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 ERVK-21P61565 698 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 RAB30Q15771 203 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 CTXN3Q4LDR2 81 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 TDRD12Q587J7 1177 aaKnown RBP27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 THEM5Q8N1Q8 247 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 SPPL3Q8TCT6 385 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 ZNF606Q8WXB4 792 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 PKMYT1Q99640 499 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 TMLHEQ9NVH6 421 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 GTF3C4Q9UKN8 822 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 CDH9Q9ULB4 789 aa27.6■■■□□ 2.01
RHBDD3-203ENST00000413137 CDH23Q9H251 3354 aa27.59■■■□□ 2.01
RHBDD3-203ENST00000413137 SOWAHDA6NJG2 315 aa27.59■■■□□ 2.01
RHBDD3-203ENST00000413137 ADAM12O43184 909 aa27.59■■■□□ 2.01
RHBDD3-203ENST00000413137 CSPG5O95196 566 aa27.59■■■□□ 2.01
RHBDD3-203ENST00000413137 PDE6CP51160 858 aa27.59■■■□□ 2.01
RHBDD3-203ENST00000413137 CCZ1BP86790 482 aa27.59■■■□□ 2.01
RHBDD3-203ENST00000413137 CCZ1P86791 482 aaPredicted RBP27.59■■■□□ 2.01
RHBDD3-203ENST00000413137 CDK17Q00537 523 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms