RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 TRIM9Q9C026 710 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 NPHS2Q9NP85 383 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 GINM1Q9NU53 330 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 GIN1Q9NXP7 522 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 CEP72Q9P209 647 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 DMTF1Q9Y222 760 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 AK5Q9Y6K8 562 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 COL3A1P02461 1466 aaPredicted RBP8.9□□□□□ -0.98
PBRM1-209ENST00000412587 RGL2O15211 777 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 YWHABP31946 246 aaKnown RBP8.9□□□□□ -0.98
PBRM1-209ENST00000412587 CHN2P52757 468 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 DEFA1P59665 94 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 DEFA3P59666 94 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 KRR1Q13601 381 aaKnown RBP8.9□□□□□ -0.98
PBRM1-209ENST00000412587 SGO2Q562F6 1265 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 CEP78Q5JTW2 689 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 C6orf183Q5T699 404 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 ANO7Q6IWH7 933 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 EIF1ADQ8N9N8 165 aaKnown RBP8.9□□□□□ -0.98
PBRM1-209ENST00000412587 TMEM35BQ8NCS4 154 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 CCDC124Q96CT7 223 aaKnown RBP8.9□□□□□ -0.98
PBRM1-209ENST00000412587 ATG4CQ96DT6 458 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 UPF3AQ9H1J1 476 aaKnown RBP8.9□□□□□ -0.98
PBRM1-209ENST00000412587 MAD1L1Q9Y6D9 718 aa8.9□□□□□ -0.98
PBRM1-209ENST00000412587 CCL15-CCL14A0A0B4J2E2 113 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 NOTOA8MTQ0 251 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 SGK1O00141 431 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 PRPSAP2O60256 369 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 SLC25A27O95847 323 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 ENO1P06733 434 aaKnown RBP8.9□□□□□ -0.99
PBRM1-209ENST00000412587 INHBAP08476 426 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 FAM58BPP0C7Q3 252 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 ANXA13P27216 316 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 STX1BP61266 288 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 KCNMA1Q12791 1236 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 PTK2BQ14289 1009 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 CCL15Q16663 113 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 C1QTNF12Q5T7M4 302 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 POTEAQ6S8J7 498 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 CCNYQ8ND76 341 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 BEST2Q8NFU1 509 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 SEPT1Q8WYJ6 367 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 BORCS5Q969J3 196 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 UBE2OQ9C0C9 1292 aaKnown RBP8.9□□□□□ -0.99
PBRM1-209ENST00000412587 TRPV6Q9H1D0 765 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 WDR70Q9NW82 654 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 HACD3Q9P035 362 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 APOBEC2Q9Y235 224 aaKnown RBP8.9□□□□□ -0.99
PBRM1-209ENST00000412587 SYNGAP1Q96PV0 1343 aa8.9□□□□□ -0.99
PBRM1-209ENST00000412587 SH3BP5O60239 455 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 GLI1P08151 1106 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 PLS3P13797 630 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 GPC3P51654 580 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CCR3P51677 355 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CASP7P55210 303 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 STAT4Q14765 748 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 QPCTQ16769 361 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CATSPER3Q86XQ3 398 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 RHOT2Q8IXI1 618 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 ADSSL1Q8N142 457 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 OR6J1Q8NGC5 347 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 GTF3C2Q8WUA4 911 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 L3MBTL3Q96JM7 780 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 DACH2Q96NX9 599 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 DDX50Q9BQ39 737 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 GDF3Q9NR23 364 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 TELO2Q9Y4R8 837 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 ADGRA3Q8IWK6 1321 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 TTI1O43156 1089 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 HUS1O60921 280 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 DGAT1O75907 488 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 TFRCP02786 760 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 LYNP07948 512 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 FDPSP14324 419 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 FLT3P36888 993 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 EFNA5P52803 228 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 KDSRQ06136 332 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CXCL9Q07325 125 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 OASLQ15646 514 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 KIAA1755Q5JYT7 1200 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 RNF149Q8NC42 400 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 RAET1EQ8TD07 263 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CEP19Q96LK0 163 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CPSF3Q9UKF6 684 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SNX5Q9Y5X3 404 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 ARHGEF28Q8N1W1 1705 aaKnown RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 ESYT2A0FGR8 921 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SPDYE2BA6NHP3 402 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SPDYE16A6NNV3 312 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 AGPSO00116 658 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SLC26A4O43511 780 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SPDYE6P0CI01 402 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CETPP11597 493 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 FGFR4P22455 802 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 CAP2P40123 477 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 GFPT1Q06210 699 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 ART3Q13508 389 aa8.89□□□□□ -0.99
PBRM1-209ENST00000412587 C15orf59Q2T9L4 293 aaPredicted RBP8.89□□□□□ -0.99
PBRM1-209ENST00000412587 SPDYE2Q495Y8 402 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms