RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 TOP6BLQ8N6T0 577 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 RDH13Q8NBN7 331 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 SMARCD2Q92925 531 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 ZSWIM3Q96MP5 696 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 SEPT5Q99719 369 aaPredicted RBP21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 ACBD6Q9BR61 282 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 EXOC1Q9NV70 894 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 SNX9Q9Y5X1 595 aa21.09■□□□□ 0.97
TSPAN4-209ENST00000409543 PRPF40AO75400 957 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 FGF19O95750 216 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 SYKP43405 635 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 TSPY1Q01534 308 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 STK4Q13043 487 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 TEAD2Q15562 447 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 SLC44A4Q53GD3 710 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 CCDC105Q8IYK2 499 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 GOLGA5Q8TBA6 731 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 HPDLQ96IR7 371 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 TRPV4Q9HBA0 871 aa21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 DDX43Q9NXZ2 648 aaKnown RBP21.08■□□□□ 0.97
TSPAN4-209ENST00000409543 A0A1W2PQ27 194 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 A0A1W2PQ64 194 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 A0A1W2PRU2 124 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 H0Y858 1186 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 HAPLN1P10915 354 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 ATF6P18850 670 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 NDUFA8P51970 172 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 MYL7Q01449 175 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 PRKCQQ04759 706 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 CYP24A1Q07973 514 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 SNW1Q13573 536 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 BECN1Q14457 450 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 VEPH1Q14D04 833 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 MLF2Q15773 248 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 NFE2Q16621 373 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 KMT5BQ4FZB7 885 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 DPH6Q7L8W6 267 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 TRAPPC11Q7Z392 1133 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 ALYREFQ86V81 257 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 DTWD2Q8NBA8 298 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 KIAA0895Q8NCT3 520 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 ZSCAN18Q8TBC5 510 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 FAM200AQ8TCP9 573 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 ATOH1Q92858 354 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 FNBP1Q96RU3 617 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 TMLHEQ9NVH6 421 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 ABI2Q9NYB9 513 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 PCDHB5Q9Y5E4 795 aa21.07■□□□□ 0.96
TSPAN4-209ENST00000409543 GABRDO14764 452 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 DLATP10515 647 aaKnown RBP21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 TNNI1P19237 187 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 LHX1P48742 406 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 MRE11P49959 708 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 CDR1P51861 262 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 SOWAHAQ2M3V2 549 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 GAREM2Q75VX8 874 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 LIMS2Q7Z4I7 341 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 ADGRF2Q8IZF7 708 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 CCDC127Q96BQ5 260 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 PHOX2BQ99453 314 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 CGRRF1Q99675 332 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 LPIN3Q9BQK8 851 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 DDX23Q9BUQ8 820 aaKnown RBP21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 ZNF334Q9HCZ1 680 aaPredicted RBP21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 SIT1Q9Y3P8 196 aa21.06■□□□□ 0.96
TSPAN4-209ENST00000409543 EXOC3O60645 756 aa21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 INTS6LQ5JSJ4 861 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 OSTM1Q86WC4 334 aa21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 TMEM174Q8WUU8 243 aa21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 E2F7Q96AV8 911 aa21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 PKMYT1Q99640 499 aa21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 TRMT61BQ9BVS5 477 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 SLITRK6Q9H5Y7 841 aa21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 ABCB6Q9NP58 842 aa21.05■□□□□ 0.96
TSPAN4-209ENST00000409543 KANSL1LA0AUZ9 987 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 RPN1P04843 607 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 PSMC3P17980 439 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 ACAT1P24752 427 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 GABRR2P28476 465 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 PCSK1P29120 753 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 VIPR2P41587 438 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 GRM2Q14416 872 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 VITQ6UXI7 678 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 FSIP1Q8NA03 581 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 PJA1Q8NG27 643 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 DEPDC1BQ8WUY9 529 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 DNASE1L2Q92874 299 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 GZF1Q9H116 711 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 ATXN3LQ9H3M9 355 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 FAM86C1Q9NVL1 165 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 DMAC2Q9NW81 257 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 DLGAP2Q9P1A6 1054 aa21.04■□□□□ 0.96
TSPAN4-209ENST00000409543 CST3P01034 146 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 TAF12Q16514 161 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 SLC9A9Q8IVB4 645 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 MFSD6LQ8IWD5 586 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 GIPC2Q8TF65 315 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 KBTBD7Q8WVZ9 684 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 ZNF516Q92618 1163 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms