RNA–Protein interactions for RNA: ENST00000409114.7

PBRM1-206, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-206ENST00000409114 PPP1R16AQ96I34 528 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 TMEM117Q9H0C3 514 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 WDCPQ9H6R7 721 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 GEMIN8Q9NWZ8 242 aaKnown RBP8.7□□□□□ -1.02
PBRM1-206ENST00000409114 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.7□□□□□ -1.02
PBRM1-206ENST00000409114 CLCA2Q9UQC9 943 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 OR6C75A6NL08 312 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 RGS16O15492 202 aaPredicted RBP8.7□□□□□ -1.02
PBRM1-206ENST00000409114 RPSAP08865 295 aaKnown RBP8.7□□□□□ -1.02
PBRM1-206ENST00000409114 PNMA6AP0CW24 399 aaPredicted RBP8.7□□□□□ -1.02
PBRM1-206ENST00000409114 VEGFBP49765 207 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 CLCN6P51797 869 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 TAF11Q15544 211 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 ZNF284Q2VY69 593 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 P3H1Q32P28 736 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 OLFML2BQ68BL8 750 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 PID1Q7Z2X4 250 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 PALB2Q86YC2 1186 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 GPR20Q99678 358 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 TACO1Q9BSH4 297 aaKnown RBP8.7□□□□□ -1.02
PBRM1-206ENST00000409114 STK33Q9BYT3 514 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 ZMYM5Q9UJ78 669 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 VPS28Q9UK41 221 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 VPS9D1Q9Y2B5 631 aa8.7□□□□□ -1.02
PBRM1-206ENST00000409114 MSH2P43246 934 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PSEN1P49768 467 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 TLE2Q04725 743 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PDK1Q15118 436 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 TIGD5Q53EQ6 642 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 ANKRD20A3Q5VUR7 823 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 SPOPLQ6IQ16 392 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CCDC62Q6P9F0 684 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 DCLRE1AQ6PJP8 1040 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 MTHFD1LQ6UB35 978 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CARNMT1Q8N4J0 409 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 ZNF296Q8WUU4 475 aaPredicted RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 ARHGEF26Q96DR7 871 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 GAD1Q99259 594 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PDGFDQ9GZP0 370 aaPredicted RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CXorf56Q9H5V9 222 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 YY1AP1Q9H869 796 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 DDIT4Q9NX09 232 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 ST3GAL5Q9UNP4 418 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PKP3Q9Y446 797 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PARP4Q9UKK3 1724 aaKnown RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PRR23AA6NEV1 266 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 SPATA31C2B4DYI2 1134 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 ARVCFO00192 962 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CHUKO15111 745 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 MYO1DO94832 1006 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 RHOCP08134 193 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 ACLYP53396 1101 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PSMD5Q16401 504 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 LLGL2Q6P1M3 1020 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 ARHGAP24Q8N264 748 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 GPR63Q9BZJ6 419 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 SUFUQ9UMX1 484 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PCDHB9Q9Y5E1 797 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CFAP69A5D8W1 941 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 FAM47DPA6NHR8 397 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 MMP3P08254 477 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CD52P31358 61 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CHKAP35790 457 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 RENBPP51606 427 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 MDM2Q00987 491 aaPredicted RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CCDC13Q8IYE1 715 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 SMG7Q92540 1137 aaKnown RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 NFKBIZQ9BYH8 718 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 NHEJ1Q9H9Q4 299 aaPredicted RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 KRT82Q9NSB4 513 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 SPTLC3Q9NUV7 552 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 NPHP3-ACAD11A0A0J9YXS1 232 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 NOL3O60936 208 aaKnown RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 RTN2O75298 545 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 YBX3P16989 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 ROR1Q01973 937 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 EFEMP1Q12805 493 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 KRT71Q3SY84 523 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 C11orf57Q6ZUT1 292 aaPredicted RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 PPHLN1Q8NEY8 458 aaKnown RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 DEPDC1BQ8WUY9 529 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 CYFIP2Q96F07 1278 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 RILPQ96NA2 401 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 EGFL8Q99944 293 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 NUP85Q9BW27 656 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 YIPF2Q9BWQ6 316 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 TMEM134Q9H6X4 195 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 UVRAGQ9P2Y5 699 aa8.69□□□□□ -1.02
PBRM1-206ENST00000409114 FBXO2Q9UK22 296 aaPredicted RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 TPX2Q9ULW0 747 aaKnown RBP8.69□□□□□ -1.02
PBRM1-206ENST00000409114 IRS2Q9Y4H2 1338 aa8.68□□□□□ -1.02
PBRM1-206ENST00000409114 KNDC1Q76NI1 1749 aa8.68□□□□□ -1.02
PBRM1-206ENST00000409114 SEC31AO94979 1220 aaKnown RBP8.68□□□□□ -1.02
PBRM1-206ENST00000409114 PCDH8O95206 1070 aa8.68□□□□□ -1.02
PBRM1-206ENST00000409114 FTLP02792 175 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-206ENST00000409114 ARL4CP56559 192 aa8.68□□□□□ -1.02
PBRM1-206ENST00000409114 PLPP4Q5VZY2 271 aa8.68□□□□□ -1.02
PBRM1-206ENST00000409114 NXNQ6DKJ4 435 aa8.68□□□□□ -1.02
PBRM1-206ENST00000409114 SAPCD2Q86UD0 394 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms